Fold library entry viewer: c1cmwA_

Added to library: Tue Mar 16 14:06:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	K	G	R	V	L	L	V	D	G	H	H	L	A	Y	R	T	F	H	A	L	K	G	L	T	T	S	R	G	E	P	V	Q	A	V	Y	G	F	A	K	S	L	L	K	A	L	K	E	D	G	D	A	V	I	V	V	F	D	A	K	A	P	S	F	R	H	E	A	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T								T	S	S	T	T		B		T	T	S		B																				S									S	S	S		T	T	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	Y	K	A	G	R	A	P	T	P	E	D	F	P	R	Q	L	A	L	I	K	E	L	V	D	L	L	G	L	A	R	L	E	V	P	G	Y	E	A	D	D	V	L	A	S	L	A	K	K	A	E	K	E	G	Y	E	V	R	I	L	T	A	D	K	D	L	Y	Q	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S							S	S															T	T							T	T	S																T	T								S	S	G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	D	R	I	H	V	L	H	P	E	G	Y	L	I	T	P	A	W	L	W	E	K	Y	G	L	R	P	D	Q	W	A	D	Y	R	A	L	T	G	D	E	S	D	N	L	P	G	V	K	G	I	G	E	K	T	A	R	K	L	L	E	E	W	G	S	L	E	A	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S						S	S	S	S										S	S				G	G	G							T	T			S	S	S								S	T	T		T	T	T	T	T	G	G	G	G	G	T	T		S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	L	D	R	L	K	P	A	I	R	E	K	I	L	A	H	M	D	D	L	K	L	S	W	D	L	A	K	V	R	T	D	L	P	L	E	V	D	F	A	K	R	R	E	P	D	R	E	R	L	R	A	F	L	E	R	L	E	F	G	S	L	L	H	E	F	G	L	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						T	T	T	T					T	S	T	T	T	T	T	T	G	G	G	G	G				S																										T	T		G	G	G	T	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	P	A	L	E	E	A	P	W	P	P	P	E	G	A	F	V	G	F	V	L	S	R	K	E	P	M	W	A	D	L	L	A	L	A	A	A	R	G	G	R	V	H	R	A	P	E	P	Y	K	A	L	R	D	L	K	E	A	R	G	L	L	A	K	D	L	S	V	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S		T	T								S	S	S		T	T	T											T	T						S										S	S	B		S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	R	E	G	L	G	L	P	P	G	D	D	P	M	L	L	A	Y	L	L	D	P	S	N	T	T	P	E	G	V	A	R	R	Y	G	G	E	W	T	E	E	A	G	E	R	A	A	L	S	E	R	L	F	A	N	L	W	G	R	L	E	G	E	E	R	L	L	W	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T					B													T	T			S								T	S					S																					T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	E	V	E	R	P	L	S	A	V	L	A	H	M	E	A	T	G	V	R	L	D	V	A	Y	L	R	A	L	S	L	E	V	A	L	E	A	E	V	F	R	L	A	G	H	P	F	N	L	N	S	R	D	Q	L	E	R	V	L	F	D	E	L	G	L	P	A	I	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T																B		B																					T	T	S	S				T	T												S								S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	E	K	T	G	K	R	S	T	S	A	A	V	L	E	A	L	R	E	A	H	P	I	V	E	K	I	L	Q	Y	R	E	L	T	K	L	K	S	T	Y	I	D	P	L	P	D	L	I	H	P	R	T	G	R	L	H	T	R	F	N	Q	T	A	T	A	T	G	R	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S	S					T	T	T	T	T	T	T	T	T	T	T		S																			T	S	S	T	T	T	S	B		T	T	T		S	B						S	S	S		S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	S	D	P	N	L	Q	N	I	P	V	R	T	P	L	G	Q	R	I	R	R	A	F	I	A	E	E	G	W	L	L	V	A	L	D	Y	S	Q	I	E	L	R	V	L	A	H	L	S	G	D	E	N	L	I	R	V	F	Q	E	G	R	D	I	H	T	E	T	A	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		G	G	G	S		T	T	S									T	B	B			T	T									T	T											T											T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	M	F	G	V	P	R	E	A	V	D	P	L	M	R	R	A	A	K	T	I	N	F	G	V	L	Y	G	M	S	A	H	R	L	S	Q	E	L	A	I	P	Y	E	E	A	Q	A	F	I	E	R	Y	F	Q	S	F	P	K	V	R	A	W	I	E	K	T	L	E	E	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T			G	G	G																T	T	S											S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	R	G	Y	V	E	T	L	F	G	R	R	R	Y	V	P	D	L	E	A	R	V	K	S	V	R	E	A	A	E	R	M	A	F	N	M	P	V	Q	G	T	A	A	D	L	M	K	L	A	M	V	K	L	F	P	R	L	E	E	M	G	A	R	M	L	L	Q	V	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S	B				S	S					B		G	G	G	G		S	S												T	T																									T	T								T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.
Sequence	E	L	V	L	E	A	P	K	E	R	A	E	A	V	A	R	L	A	K	E	V	M	E	G	V	Y	P	L	A	V	P	L	E	V	E	V	G	I	G	E	D	W	L	S	A	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T														T	S	S			S	S										S	B

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PDB structure

FASTA sequence

Hidden Markov model

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