PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1cf2Q_

Fold library id	PDB Header	Molecule	Title
c1cf2Q_	PDB header: oxidoreductase	Chain: Q: PDB Molecule: protein (glyceraldehyde-3-phosphate	PDBTitle: three-dimensional structure of d-glyceraldehyde-3-phosphate2 dehydrogenase from the hyperthermophilic archaeon3 methanothermus fervidus

Links to external resources
Added to library: Tue Mar 16 13:12:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K A V A I N G Y G T V G K R V A D A I A Q Q D D M K V I G V S K T R P D F E A R M A L K K G Y D L Y V A I P E R V K L F E K A G I E V A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S T T S S
S T T
S S G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T V D D M L D E A D I V I D C T P E G I G A K N L K M Y K E K G I K A I F Q G G E K H E D I G L S F N S L S N Y E E S Y G K D Y T R V V S C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T T
T T S
S
G G G G T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N T T G L C R T L K P L H D S F G I K K V R A V I V R R G A D P A Q V S K G P I N A I I P N P P K L P S H H G P D V K T V L D I N I D T M A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T
S S
S S S S S S
T T T S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V I V P T T L M H Q H N V M V E V E E T P T V D D I I D V F E D T P R V I L I S A E D G L T S T A E I M E Y A K E L G R S R N D L F E I P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S S
S T T
G G G T
S T
G G G
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . .

Sequence W R E S I T V V D N E I Y Y M Q A V H Q E S D I V P E N V D A V R A I L E M E E D K Y K S I N K T N K A M N I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
T T
T T T T T T T S
S
T

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	A	V	A	I	N	G	Y	G	T	V	G	K	R	V	A	D	A	I	A	Q	Q	D	D	M	K	V	I	G	V	S	K	T	R	P	D	F	E	A	R	M	A	L	K	K	G	Y	D	L	Y	V	A	I	P	E	R	V	K	L	F	E	K	A	G	I	E	V	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	T	T											S	T	T									S	S		S									T	T						S	S	G	G	G							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	V	D	D	M	L	D	E	A	D	I	V	I	D	C	T	P	E	G	I	G	A	K	N	L	K	M	Y	K	E	K	G	I	K	A	I	F	Q	G	G	E	K	H	E	D	I	G	L	S	F	N	S	L	S	N	Y	E	E	S	Y	G	K	D	Y	T	R	V	V	S	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T		S								T	T													T							T	T	S						S									G	G	G	G	T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	T	T	G	L	C	R	T	L	K	P	L	H	D	S	F	G	I	K	K	V	R	A	V	I	V	R	R	G	A	D	P	A	Q	V	S	K	G	P	I	N	A	I	I	P	N	P	P	K	L	P	S	H	H	G	P	D	V	K	T	V	L	D	I	N	I	D	T	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													S	S		T	T		T	T				S	S					S	S	S	S	S	S		T							T	T	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	I	V	P	T	T	L	M	H	Q	H	N	V	M	V	E	V	E	E	T	P	T	V	D	D	I	I	D	V	F	E	D	T	P	R	V	I	L	I	S	A	E	D	G	L	T	S	T	A	E	I	M	E	Y	A	K	E	L	G	R	S	R	N	D	L	F	E	I	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S	S											S	S														S	T	T						G	G	G	T			S												T		G	G	G				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Sequence	W	R	E	S	I	T	V	V	D	N	E	I	Y	Y	M	Q	A	V	H	Q	E	S	D	I	V	P	E	N	V	D	A	V	R	A	I	L	E	M	E	E	D	K	Y	K	S	I	N	K	T	N	K	A	M	N	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G					T	T										T	T	T	T	T												T	T	S		S														T