PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1cerC_

Fold library id	PDB Header	Molecule	Title
c1cerC_	PDB header: oxidoreductase (aldehyde(d)-nad(a))	Chain: C: PDB Molecule: holo-d-glyceraldehyde-3-phosphate dehydrogenase;	PDBTitle: determinants of enzyme thermostability observed in the2 molecular structure of thermus aquaticus d-glyceraldehyde-3 3-phosphate dehydrogenase at 2.5 angstroms resolution

Links to external resources
Added to library: Tue Mar 16 13:08:11 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K V G I N G F G R I G R Q V F R I L H S R G V E V A L I N D L T D N K T L A H L L K Y D S I Y H R F P G E V A Y D D Q Y L Y V D G K A I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S S
T T T
S
S S
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A T A V K D P K E I P W A E A G V G V V I E S T G V F T D A D K A K A H L E G G A K K V I I T A P A K G E D I T I V M G V N H E A Y D P S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G S
T
S S S
B G G G G G G T
S S S
B S
S
T T T S G G G
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H H I I S N A S C T T N S L A P V M K V L E E A F G V E K A L M T T V H S Y T N D Q R L L D L P H K D L R R A R A A A I N I I P T T T G A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S B S S S
S S T T T T S B G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence K A T A L V L P S L K G R F D G M A L R V P T A T G S I S D I T A L L K R E V T A E E V N A A L K A A A E G P L K G I L A Y T E D E I V L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T T S
S S
S S
T T T B T T
S
G G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 .

Sequence D I V M D P H S S I V D A K L T K A L G N M V K V F A W Y D N E W G Y A N R V A D L V E L V L R K G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S T T
S G G G
T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	V	G	I	N	G	F	G	R	I	G	R	Q	V	F	R	I	L	H	S	R	G	V	E	V	A	L	I	N	D	L	T	D	N	K	T	L	A	H	L	L	K	Y	D	S	I	Y	H	R	F	P	G	E	V	A	Y	D	D	Q	Y	L	Y	V	D	G	K	A	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S													T	T									S	S													T	T	T		S		S	S						S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	T	A	V	K	D	P	K	E	I	P	W	A	E	A	G	V	G	V	V	I	E	S	T	G	V	F	T	D	A	D	K	A	K	A	H	L	E	G	G	A	K	K	V	I	I	T	A	P	A	K	G	E	D	I	T	I	V	M	G	V	N	H	E	A	Y	D	P	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		G	G	G	S						T								S	S	S			B					G	G	G	G	G	G	T		S					S	S			B	S		S					T	T	T	S	G	G	G			T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	H	I	I	S	N	A	S	C	T	T	N	S	L	A	P	V	M	K	V	L	E	E	A	F	G	V	E	K	A	L	M	T	T	V	H	S	Y	T	N	D	Q	R	L	L	D	L	P	H	K	D	L	R	R	A	R	A	A	A	I	N	I	I	P	T	T	T	G	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T															T															T	T	S	B	S	S	S				S	S	T	T	T	T	S	B	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	A	T	A	L	V	L	P	S	L	K	G	R	F	D	G	M	A	L	R	V	P	T	A	T	G	S	I	S	D	I	T	A	L	L	K	R	E	V	T	A	E	E	V	N	A	A	L	K	A	A	A	E	G	P	L	K	G	I	L	A	Y	T	E	D	E	I	V	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	T	T	T									S		S	S											S	S																	T	T	T	B	T	T						S				G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Sequence	D	I	V	M	D	P	H	S	S	I	V	D	A	K	L	T	K	A	L	G	N	M	V	K	V	F	A	W	Y	D	N	E	W	G	Y	A	N	R	V	A	D	L	V	E	L	V	L	R	K	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S	T	T				S					G	G	G					T	T										T	T																	T