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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1c9lA_

Fold library idPDB HeaderMoleculeTitle
c1c9lA_PDB header: endocytosis/exocytosisChain: A: PDB Molecule: clathrin;PDBTitle: peptide-in-groove interactions link target proteins to the2 b-propeller of clathrin


Added to library: Tue Mar 16 13:14:07 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAI
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Known secondary structure (DSSP)


SGGGGT

GGG
STTT
SSSSTTTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence MNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMF
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Known secondary structure (DSSP)
SSSSTTTTTT
SS

SSSSS
SSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEE
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Known secondary structure (DSSP)

GGGTT

TTS
TTTTTT
S

TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI
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Known secondary structure (DSSP) TT
SS

TT










TT
SS

TTTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence HLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMA
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Known secondary structure (DSSP) TTT



SS
TTTTTTT
TTTTTS

 .......
Sequence VRNNLAG
Predicted secondary structure




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Known secondary structure (DSSP) TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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