Fold library entry viewer: c1bf2A_

Added to library: Tue Mar 16 12:32:07 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	I	N	S	M	S	L	G	A	S	Y	D	A	Q	Q	A	N	I	T	F	R	V	Y	S	S	Q	A	T	R	I	V	L	Y	L	Y	S	A	G	Y	G	V	Q	E	S	A	T	Y	T	L	S	P	A	G	S	G	V	W	A	V	T	V	P	V	S	S	I	K	A	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T								T	T	S	S									S	S		S								S	S	S	S	S				S									S	T	T														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	T	G	A	V	Y	Y	G	Y	R	A	W	G	P	N	W	P	Y	A	S	N	W	G	K	G	S	Q	A	G	F	V	S	D	V	D	A	N	G	D	R	F	N	P	N	K	L	L	L	D	P	Y	A	Q	E	V	S	Q	D	P	L	N	P	S	N	Q	N	G	N	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										B	T	T	B				T	T			T	T			T	T				S	S		T	T						T	T	S		B			T	T		S		B	S			S	S		S	S				G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	G	A	S	Y	R	T	T	D	S	G	I	Y	A	P	K	G	V	V	L	V	P	S	T	Q	S	T	G	T	K	P	T	R	A	Q	K	D	D	V	I	Y	E	V	H	V	R	G	F	T	E	Q	D	T	S	I	P	A	Q	Y	R	G	T	Y	Y	G	A	G	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		S	T	T	T	T	T				T	T	T	S																					G	G	G													T	T		T	T	S		G	G	G	T	T	S							T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	S	Y	L	A	S	L	G	V	T	A	V	E	F	L	P	V	Q	E	T	Q	N	D	A	N	D	V	V	P	N	S	D	A	N	Q	N	Y	W	G	Y	M	T	E	N	Y	F	S	P	D	R	R	Y	A	Y	N	K	A	A	G	G	P	T	A	E	F	Q	A	M	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T							S			B		B	S		T	T	T	T	S	S	T	T			T	T				S				B	S		S	S		B		G	G	G		S			S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	F	H	N	A	G	I	K	V	Y	M	D	V	V	Y	N	H	T	A	E	G	G	T	W	T	S	S	D	P	T	T	A	T	I	Y	S	W	R	G	L	D	N	A	T	Y	Y	E	L	T	S	G	N	Q	Y	F	Y	D	N	T	G	I	G	A	N	F	N	T	Y	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T										S	S		T	T		S	B	S	S	S	S		S	S		B	B		S	S										B		B		T	T	S	S	S	B			S	S	S	S	S			B		T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	A	Q	N	L	I	V	D	S	L	A	Y	W	A	N	T	M	G	V	D	G	F	R	F	D	L	A	S	V	L	G	N	S	C	L	N	G	A	Y	T	A	S	A	P	N	C	P	N	G	G	Y	N	F	D	A	A	D	S	N	V	A	I	N	R	I	L	R	E	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S								T	T	G	G	G	G	G	B			S	S	S	S			T	T	S	T	T		T	T		S			B		T	T		T	T	S									S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	R	P	A	A	G	G	S	G	L	D	L	F	A	E	P	W	A	I	G	G	N	S	Y	Q	L	G	G	F	P	Q	G	W	S	E	W	N	G	L	F	R	D	S	L	R	Q	A	Q	N	E	L	G	S	M	T	I	Y	V	T	Q	D	A	N	D	F	S	G	S	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B			T	T			S	S	B									S	S	T	T				T	T		S		T	T																			B	T	T	B												T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	F	Q	S	S	G	R	S	P	W	N	S	I	N	F	I	D	V	H	D	G	M	T	L	K	D	V	Y	S	C	N	G	A	N	N	S	Q	A	W	P	Y	G	P	S	D	G	G	T	S	T	N	Y	S	W	D	Q	G	M	S	A	G	T	G	A	A	V	D	Q	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T			G	G	G					S			S	S	S							T	T		S	S							T	T	S								S							T	T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	A	R	T	G	M	A	F	E	M	L	S	A	G	T	P	L	M	Q	G	G	D	E	Y	L	R	T	L	Q	C	N	N	N	A	Y	N	L	D	S	S	A	N	W	L	T	Y	S	W	T	T	D	Q	S	N	F	Y	T	F	A	Q	R	L	I	A	F	R	K	A	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	S						T	T	G	G	G	T				T	T		S			T	T			S	T	T	T	S																											G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	L	R	P	S	S	W	Y	S	G	S	Q	L	T	W	Y	Q	P	S	G	A	V	A	D	S	N	Y	W	N	N	T	S	N	Y	A	I	A	Y	A	I	N	G	P	S	L	G	D	S	N	S	I	Y	V	A	Y	N	G	W	S	S	S	V	T	F	T	L	P	A	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S		S	S				T	T	T						T	T	S	S	B							T		T	T										G	G	G	G	T		S	S									S	S	S										S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750
Sequence	S	G	T	Q	W	Y	R	V	T	D	T	C	D	W	N	D	G	A	S	T	F	V	A	P	G	S	E	T	L	I	G	G	A	G	T	T	Y	G	Q	C	G	Q	S	L	L	L	L	I	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S									S	G	G	G		S	T	T	S	B			T	T							S	T	T							S	S

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PDB structure

FASTA sequence

Hidden Markov model

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