Fold library entry viewer: c1avfJ_

Added to library: Tue Mar 16 14:07:32 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	T	Y	E	P	M	A	Y	M	D	A	A	Y	F	G	E	I	S	I	G	T	P	P	Q	N	F	L	V	L	F	D	T	G	S	S	N	L	W	V	P	S	V	Y	C	Q	S	Q	A	C	T	S	H	S	R	F	N	P	S	E	S	S	T	Y	S	T	N	G	Q	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		T	T										T	T	T	T									T	T								B	T	T			S					T	S			B		G	G	G		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	Q	Y	G	S	G	S	L	T	G	F	F	G	Y	D	T	L	T	V	Q	S	I	Q	V	P	N	Q	E	F	G	L	S	E	N	E	P	G	T	N	F	V	Y	A	Q	F	D	G	I	M	G	L	A	Y	P	A	L	S	V	D	E	A	T	T	A	M	Q	G	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T															T	T												S	S		S	S	G	G	G	G	G		S								S		G	G	G	S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	E	G	A	L	T	S	P	V	F	S	V	Y	L	S	G	G	A	V	V	F	G	G	V	D	S	S	L	Y	T	G	Q	I	Y	W	A	P	V	T	Q	E	L	Y	W	Q	I	G	I	E	E	F	L	I	G	G	Q	A	S	G	W	C	S	E	G	C	Q	A	I	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			S	S	S														S	S			G	G	G														T	T											T	T				S	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	G	T	S	L	L	T	V	P	Q	Q	Y	M	S	A	L	L	Q	A	T	G	A	Q	E	D	E	Y	G	Q	F	L	V	N	C	N	S	I	Q	N	L	P	S	L	T	F	I	I	N	G	V	E	F	P	L	P	P	S	S	Y	I	L	S	N	N	G	Y	C	T	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S					G	G	G									T					T	T	S						G	G	G	G	G	G	S								T	T															S	S	S				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Sequence	V	E	P	T	Y	L	S	S	Q	N	G	Q	P	L	W	I	L	G	D	V	F	L	R	S	Y	Y	S	V	Y	D	L	G	N	N	R	V	G	F	A	T	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B	T	T	B											T	T							T	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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