PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1ankA_

Fold library id	PDB Header	Molecule	Title
c1ankA_	PDB header: transferase(phosphotransferase)	Chain: A: PDB Molecule: adenylate kinase;	PDBTitle: the closed conformation of a highly flexible protein: the2 structure of e. coli adenylate kinase with bound amp and3 amppnp

Links to external resources
Added to library: Tue Mar 16 13:57:13 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M R I I L L G A P G A G K G T Q A Q F I M E K Y G I P Q I S T G D M L R A A V K S G S E L G K Q A K D I M D A G K L V T D E L V I A L V K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T
T T T T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R I A Q E D C R N G F L L D G F P R T I P Q A D A M K E A G I N V D Y V L E F D V P D E L I V D R I V G R R V H A P S G R V Y H V K F N P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
T T S
S
S T T T T T
S
G G G T T T T T T T T B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K V E G K D D V T G E E L T T R K D D Q E E T V R K R L V E Y H Q M T A P L I G Y Y S K E A E A G N T K Y A K V D G T K P V A E V R A D L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T B
T T T
B
B
T T
S T T T S
T T S

. . . .

Sequence K I L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	I	I	L	L	G	A	P	G	A	G	K	G	T	Q	A	Q	F	I	M	E	K	Y	G	I	P	Q	I	S	T	G	D	M	L	R	A	A	V	K	S	G	S	E	L	G	K	Q	A	K	D	I	M	D	A	G	K	L	V	T	D	E	L	V	I	A	L	V	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S	S																														T		T	T	T	T	T								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	I	A	Q	E	D	C	R	N	G	F	L	L	D	G	F	P	R	T	I	P	Q	A	D	A	M	K	E	A	G	I	N	V	D	Y	V	L	E	F	D	V	P	D	E	L	I	V	D	R	I	V	G	R	R	V	H	A	P	S	G	R	V	Y	H	V	K	F	N	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S		T	T	S						S				S							T	T	T	T	T				S									G	G	G							T					T	T	T	T					T	T	T	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	V	E	G	K	D	D	V	T	G	E	E	L	T	T	R	K	D	D	Q	E	E	T	V	R	K	R	L	V	E	Y	H	Q	M	T	A	P	L	I	G	Y	Y	S	K	E	A	E	A	G	N	T	K	Y	A	K	V	D	G	T	K	P	V	A	E	V	R	A	D	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	B		T	T	T			B		B			T	T		S															T	T													T	S								T	T	S
	.	.	.	.
Sequence	K	I	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)