Fold library entry viewer: c1ai4B_

Added to library: Tue Mar 16 12:37:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	M	W	V	I	G	K	S	K	A	Q	D	A	K	A	I	M	V	N	G	P	Q	F	G	W	Y	A	P	A	Y	T	Y	G	I	G	L	H	G	A	G	Y	D	V	T	G	N	T	P	F	A	Y	P	G	L	V	F	G	H	N	G	V	I	S	W	G	S	T	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	B	S	S	S	S												B	S	S		S									T	T									T	T		S	S		S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	G	D	D	V	D	I	F	A	E	R	L	S	A	E	K	P	G	Y	Y	L	H	N	G	K	W	V	K	M	L	S	R	E	E	T	I	T	V	K	N	G	Q	A	E	T	F	T	V	W	R	T	V	H	G	N	I	L	Q	T	D	Q	T	T	Q	T	A	Y	A	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B												S	S	S	T	T					T	T															T	T	S											T	T								T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	A	W	D	G	K	E	V	A	S	L	L	A	W	T	H	Q	M	K	A	K	N	W	Q	Q	W	T	Q	Q	A	A	K	Q	A	L	T	I	N	W	Y	Y	A	D	V	N	G	N	I	G	Y	V	H	T	G	A	Y	P	D	R	Q	S	G	H	D	P	R	L	P	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T												G	G	G			S									T	T			S	S								T	T	S								S							T	T			T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	T	G	K	W	D	W	K	G	L	L	P	F	E	M	N	P	K	V	Y	N	P	Q	S	G	Y	I	A	N	W	N	N	S	P	Q	K	D	Y	P	A	S	D	L	F	A	F	L	W	G	G	A	D	R	V	T	E	I	D	R	L	L	E	Q	K	P	R	L	T	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T								G	G	G	S					S		T	T	S					S	S			S	S	T	T			B				T	T					S	S		T										T	S	S	S	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	A	W	D	V	I	R	Q	T	S	R	Q	D	L	N	L	R	L	F	L	P	T	L	Q	A	A	T	S	G	L	T	Q	S	D	P	R	R	Q	L	V	E	T	L	T	R	W	D	G	I	N	L	L	N	D	D	G	K	T	W	Q	Q	P	G	S	A	I	L	N	V	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												B		S	S												T	T	T			T	T												T			S	B			B		T	T	S	S			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	T	S	M	L	K	R	T	V	V	A	A	V	P	M	P	F	D	K	W	Y	S	A	S	G	Y	E	T	T	Q	D	G	P	T	G	S	L	N	I	S	V	G	A	K	I	L	Y	E	A	V	Q	G	D	K	S	P	I	P	Q	A	V	D	L	F	A	G	K	P	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T					S		T	T	G	G	G	G	G				S					T	T			S	S															T	T	G	G	G	S	S	S			S	S		T	T	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	V	V	L	A	A	L	E	D	T	W	E	T	L	S	K	R	Y	G	N	N	V	S	N	W	K	T	P	A	M	A	L	T	F	R	A	N	N	F	F	G	V	P	Q	A	A	A	E	E	T	R	H	Q	A	E	Y	Q	N	R	G	T	E	N	D	M	I	V	F	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S		G	G	G											B	S	B		T	T	S		B	S	S		G	G	G					S	S				S		S	S							S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Sequence	T	T	S	D	R	P	V	L	A	W	D	V	V	A	P	G	Q	S	G	F	I	A	P	D	G	T	V	D	K	H	Y	E	D	Q	L	K	M	Y	E	N	F	G	R	K	S	L	W	L	T	K	Q	D	V	E	A	H	K	E	S	Q	E	V	L	H	V	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S	S								S	S		S				B		T	T	S		B		T	T	S	S	S	S						T	T								S							T

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PDB structure

FASTA sequence

Hidden Markov model

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