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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1a77A_

Fold library idPDB HeaderMoleculeTitle
c1a77A_PDB header: 5'-3' exo/endo nucleaseChain: A: PDB Molecule: flap endonuclease-1 protein;PDBTitle: flap endonuclease-1 from methanococcus jannaschii


Added to library: Tue Mar 16 14:06:06 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVQFGDFIPKNIISFEDLKGKKVAIDGMNALYQFLTSIRLRDGSPLRNRKGEITSAYNGVFYKTIHLLEN
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Known secondary structure (DSSP)



GGGS



SGGGTT
SB
TTS
B
B
TTS
B
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DITPIWVFDGEPPKLKEKTRKVRREMKEKAELKMKEAIKKEDFEEAAKYAKRVSYLTPKMVENCKYLLSL
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Known secondary structure (DSSP) T



TT



SS

SS
SSSSSSS






SSSTTSSSSTT
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence MGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDALLYGAPRVVRNLTTTKEMPELIELNEVLEDLRISL
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Known secondary structure (DSSP) T


SS
TSSS
SSSGGGGGT
SSSS

SS

T

 .........220.........230.........240.........250.........260.........270.........280
Sequence DDLIDIAIFMGTDYNPGGVKGIGFKRAYELVRSGVAKDVLKKEVEYYDEIKRIFKEPKVTDNYSLSLKLP
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Known secondary structure (DSSP)

TTSTT
STT

TT

TTS













 .........290.........300.........310.....
Sequence DKEGIIKFLVDENDFNYDRVKKHVDKLYNLIANKT
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Known secondary structure (DSSP)
TTTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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