List of SCOP superfamilies

102 superfamilies found in Mycoplasma genitalium

rank	freq.	Superfamily	Fold	Class
1	20	P-loop containing nucleotide triphosphate hydrolases	P-loop containing nucleotide triphosphate hydrolases	Alpha and beta (a/b)
2	10	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Alpha and beta (a+b)
3	9	Nucleic acid-binding proteins	OB-fold	All beta
4	8	Class I aminoacyl-tRNA synthetases (RS), catalytic domain	Adenine nucleotide alpha hydrolase	Alpha and beta (a/b)
4	8	FAD/NAD(P)-binding domain	FAD/NAD(P)-binding domain	Alpha and beta (a/b)
6	4	An anticodon-binding domain of Class II aaRS	An anticodon-binding domain of Class II aaRS	Alpha and beta (a/b)
6	4	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Alpha and beta (a/b)
6	4	Thiamin-binding	Thiamin-binding	Alpha and beta (a/b)
6	4	actin-like ATPase domain	Ribonuclease H-like motif	Alpha and beta (a/b)
6	4	adenine nucleotide alpha hydrolases	Adenine nucleotide alpha hydrolase	Alpha and beta (a/b)
11	3	Chaperone J-domain	Long alpha-hairpin	All alpha
11	3	Translation factors	Reductase/isomerase/elongation factor common domain	All beta
11	3	DNA clamp	DNA clamp	Alpha and beta (a+b)
11	3	S-adenosylmethionine synthetase. MAT	S-adenosylmethionine synthetase. MAT	Alpha and beta (a+b)
11	3	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	Alpha and beta (a/b)
11	3	Elongation factor Tu (EF-Tu), the C-terminal domain	Elongation factor Tu (EF-Tu), the C-terminal domain	All beta
11	3	Phosphoribosyltransferases (PRTases)	Phosphoribosyltransferases (PRTases)	Alpha and beta (a/b)
11	3	Phosphoglucomutase, first 3 domains	Phosphoglucomutase, first 3 domains	Alpha and beta (a/b)
11	3	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Alpha and beta (a/b)
20	2	Glutathione synthetase ATP-binding domain-like	ATP-grasp	Alpha and beta (a+b)
20	2	Biotin carboxylase N-terminal domain-like	Biotin carboxylase N-terminal domain-like	Alpha and beta (a/b)
20	2	type II DNA topoisomerase	type II DNA topoisomerase	Multi-domain (alpha and beta)
20	2	Transketolase, C-terminal domain	Transketolase, C-terminal domain	Alpha and beta (a/b)
20	2	Zn metallo-beta-lactamase	Zn metallo-beta-lactamase	Alpha and beta (a+b)
20	2	The N-terminal domain of alpha and beta subunits of F1 ATP synthase	A domain of alpha and beta subunits of F1 ATP synthase-like	All beta
20	2	The C-terminal domain of alpha and beta subunits of F1 ATP synthase	Left-handed superhelix	All alpha
20	2	Creatinase/methionine aminopeptidase	Creatinase/methionine aminopeptidase	Alpha and beta (a+b)
20	2	Dihydrofolate reductases	Dihydrofolate reductases	Alpha and beta (a/b)
20	2	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Alpha and beta (a+b)
20	2	Elongation factor G (EF-G), domain V	Ferredoxin-like	Alpha and beta (a+b)
20	2	Elongation factor Ts (EF-Ts), dimerisation domain	Elongation factor Ts (EF-Ts), dimerisation domain	Alpha and beta (a+b)
20	2	PLP-dependent transferases	PLP-dependent transferases	Alpha and beta (a/b)
20	2	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	FAD/NAD-linked reductases, dimerisation (C-terminal) domain	Alpha and beta (a+b)
20	2	Phosphoenolpyruvate/pyruvate domain	beta/alpha (TIM)-barrel	Alpha and beta (a/b)
20	2	Membrane all-alpha	Membrane all-alpha	Membrane and cell surface proteins and peptides
36	1	Tyrosyl-tRNA synthetase, middle domain	Tyrosyl-tRNA synthetase, middle domain	All alpha
36	1	GreA transcript cleavage factor, C-terminal domain	FKBP-like	Alpha and beta (a+b)
36	1	Zn-dependent exopeptidases	Phosphorylase/hydrolase-like	Alpha and beta (a/b)
36	1	ATP syntase (F1-ATPase), gamma subunit	ATP syntase (F1-ATPase), gamma subunit	All alpha
36	1	GroEL, the ATPase domain	GroEL, the ATPase domain	All alpha
36	1	GroES-like	GroES-like	All beta
36	1	GreA transcript cleavage protein, N-terminal domain	Long alpha-hairpin	All alpha
36	1	Histidine-containing phosphocarrier proteins (HPr)	Histidine-containing phosphocarrier proteins (HPr)	Alpha and beta (a+b)
36	1	HIT-like	HIT-like	Alpha and beta (a+b)
36	1	Inorganic pyrophosphatase	OB-fold	All beta
36	1	Lactate & malate dehydrogenases, C-terminal domain	Lactate & malate dehydrogenases, C-terminal domain	Alpha and beta (a+b)
36	1	A nucleotide-binding domain	A nucleotide-binding domain	Alpha and beta (a/b)
36	1	N-terminal domain of enolase & muconate-lactonizing enzyme	N-terminal domain of enolase & muconate-lactonizing enzyme	Alpha and beta (a+b)
36	1	N-terminal domain of the delta subunit of the F1F0-ATP synthase	N-terminal domain of the delta subunit of the F1F0-ATP synthase	All alpha
36	1	GMP synthetase, the C-terminal, dimerisation domain	GMP synthetase, the C-terminal, dimerisation domain	Alpha and beta (a+b)
36	1	Glycinamide ribonucleotide transformylase	Glycinamide ribonucleotide transformylase	Alpha and beta (a/b)
36	1	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Alpha and beta (a+b)
36	1	Peptide deformylase catalytic core	Peptide deformylase catalytic core	Alpha and beta (a+b)
36	1	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Alpha and beta (a/b)
36	1	Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain	Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain	All beta
36	1	Phosphofructokinase	Phosphofructokinase	Alpha and beta (a/b)
36	1	Ferritin-like	Ferritin-like	All alpha
36	1	Phosphoglucomutase, the C-terminal domain	TBP-like	Alpha and beta (a+b)
36	1	Phosphoglycerate kinase	Phosphoglycerate kinase	Alpha and beta (a/b)
36	1	Acyl-carrier protein (ACP)	Acyl carrier protein-like	All alpha
36	1	FAD-linked reductases, C-terminal domain	FAD-linked reductases, C-terminal domain	Alpha and beta (a+b)
36	1	Enolase & muconate-lactonizing enzyme, C-terminal domain	beta/alpha (TIM)-barrel	Alpha and beta (a/b)
36	1	Protein kinases (PK), catalytic core	Protein kinases (PK), catalytic core	Multi-domain (alpha and beta)
36	1	Purine and uridine phosphorylases	Phosphorylase/hydrolase-like	Alpha and beta (a/b)
36	1	Pyruvate kinase beta-barrel domain	Pyruvate kinase beta-barrel domain	All beta
36	1	CoA-dependent acetyltransferases	CoA-dependent acetyltransferases	Alpha and beta (a/b)
36	1	R1 subunit of ribonucleotide reductase, C-terminal domain	R1 subunit of ribonucleotide reductase, C-terminal domain	Alpha and beta (a/b)
36	1	R1 subunit of ribonucleotide reductase, N-terminal domain	R1 subunit of ribonucleotide reductase, N-terminal domain	All alpha
36	1	RecA protein, C-terminal domain	Anti-LPS factor/recA domain	Alpha and beta (a+b)
36	1	Ribosomal protein L1	Ribosomal protein L1	Multi-domain (alpha and beta)
36	1	Ribosomal protein L11, the C-terminal domain	DNA-binding 3-helical bundle	All alpha
36	1	Ribosomal protein L14	Ribosomal protein L14	All beta
36	1	Ribosomal protein L7/12, C-terminal fragment	Ribosomal protein L7/12, C-terminal fragment	Alpha and beta (a+b)
36	1	Ribosomal protein S15 from	Ribosomal protein S15 from	All alpha
36	1	Duplicated hybrid motif	Barrel-sandwich hybrid	All beta
36	1	Ribosomal protein S6	Ferredoxin-like	Alpha and beta (a+b)
36	1	Ribosomal protein S8	Ribosomal protein S8	Alpha and beta (a+b)
36	1	DNA helicase RuvA subunit, the middle domain	DNA helicase RuvA subunit, the middle domain	All alpha
36	1	DNA helicase RuvA subunit, C-terminal domain	DNA helicase RuvA subunit, C-terminal domain	All alpha
36	1	Single hybrid motif	Barrel-sandwich hybrid	All beta
36	1	Cytidine deaminase	Cytidine deaminase	Alpha and beta (a/b)
36	1	Creatinase, N-terminal domain	Ribonuclease H-like motif	Alpha and beta (a/b)
36	1	the C-terminal domain of RNA polymerase alpha subunit	the C-terminal domain of RNA polymerase alpha subunit	All alpha
36	1	The coiled-coil domain of nucleotide exchange factor GrpE	Oligomers of long helices	All alpha
36	1	The head domain of nucleotide exchange factor GrpE	The head domain of nucleotide exchange factor GrpE	All beta
36	1	The intermediate domain of GroEL	The intermediate domain of GroEL	Alpha and beta (a+b)
36	1	A sigma70 subunit fragment from RNA polymerase	A sigma70 subunit fragment from RNA polymerase	All alpha
36	1	Uracil-DNA glycosylase	Uracil-DNA glycosylase	Alpha and beta (a/b)
36	1	Thioredoxin-like	Thioredoxin fold	Alpha and beta (a/b)
36	1	Thymidylate synthase	Thymidylate synthase	Alpha and beta (a+b)
36	1	5' to 3' exonuclease	5' to 3' exonuclease	Alpha and beta (a/b)
36	1	type I DNA topoisomerase	type I DNA topoisomerase	Multi-domain (alpha and beta)
36	1	Translation initiation factor IF3	IF3-like	Alpha and beta (a+b)
36	1	Translation initiation factor IF3, N-terminal domain	beta-Grasp	Alpha and beta (a+b)
36	1	Triosephosphate isomerase (TIM)	beta/alpha (TIM)-barrel	Alpha and beta (a/b)
36	1	Phosphohistidine domain	The "swivelling" beta/beta/alpha domain	Alpha and beta (a/b)
36	1	Flavoproteins	Flavodoxin-like	Alpha and beta (a/b)
36	1	Heat shock protein 70kD (HSP70), C-terminal, substrate-binding fragment	Heat shock protein 70kD (HSP70), C-terminal, substrate-binding fragment	Multi-domain (alpha and beta)
36	1	Pyruvate kinase, C-terminal domain	Pyruvate kinase, C-terminal domain	Alpha and beta (a/b)
36	1	Class II aldolases	beta/alpha (TIM)-barrel	Alpha and beta (a/b)
36	1	the apical domain of GroEL	The "swivelling" beta/beta/alpha domain	Alpha and beta (a/b)
36	1	Xylose isomerase	beta/alpha (TIM)-barrel	Alpha and beta (a/b)