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Job DescriptionP33594
Confidence100.00%DateThu Jan 5 11:52:19 GMT 2012
Rank19Aligned Residues243
% Identity30%Templatec3d31B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  LLNISGLSHHYAHGGFNGKHQHQAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVGLESPAQGNISWRGEPLAKLNRA
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Template Sequence  MIEIESLSRKWKN. . . . . . . . . . FSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPE
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   1........10... ......20.........30.........40.........50.........60.........70
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  QRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRVCL
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Template Sequence  KHDI. . . . . AFVYQNYS. . LFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKI. . . . . EHLLDRNPLTLSGGEQQRVAL
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   71... .....80.. .......90.........100.........110....... ..120.........130........
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  ARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQVVGEKLTF
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Template Sequence  ARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEK
Template Known Secondary structure  TTS

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   139140.........150.........160.........170.........180.........190.........200.........210........
 
   243......250.........260.......
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Query Sequence  SSDAGRVLQNAVLPAFPVRRRTTEK
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Template Sequence  PVEGRVASFVGFENVLKGRVISAEQ
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   219220.........230.........240...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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