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Job DescriptionP33594
Confidence100.00%DateThu Jan 5 11:52:19 GMT 2012
Rank54Aligned Residues206
% Identity25%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TLLNISGLSHHYAHGGFNGKHQHQAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVGLESPAQGNISWRGEPLAKLNR
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Template Sequence  TLVEYPRLVKDYGS. . . . . . . . . . FKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT. . . . . . .
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   342.......350..... ....360.........370.........380.........390.........400....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AQRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRVC
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Template Sequence  . . . . . . . . . VAYKPQYIK. . AEYEGTVYELLSK. . . . . IDSSKLNSNFYKTELLKPLGII. DLYDRNVEDLSGGELQRVA
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   405....410... ......420...... ...430.........440........ .450.........460.......
 
   162.......170.........180.........190.........200.........210.........220...... ...230.........
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Query Sequence  LARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMD. . NGQIVETQVVGEK
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Template Sequence  IAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGM
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   468.470.........480.........490.........500.........510.........520.........530.........540.......
 
   240.
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Query Sequence  LT
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Template Sequence  RE
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   548.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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