Job Description P33594 Confidence 100.00% Date Thu Jan 5 11:52:19 GMT 2012 Rank 6 Aligned Residues 228 % Identity 35% Template c2it1B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii Resolution 1.94 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	L	L	N	I	S	G	L	S	H	H	Y	A	H	G	G	F	N	G	K	H	Q	H	Q	A	V	L	N	N	V	S	L	T	L	K	S	G	E	T	V	A	L	L	G	R	S	G	C	G	K	S	T	L	A	R	L	L	V	G	L	E	S	P	A	Q	G	N	I	S	W	R	G	E	P	L	A	K	L	N
Query Conservation
Alig confidence				.												.	.	.	.	.	.	.	.	.
Template Conservation				.												.	.	.	.	.	.	.	.	.
Template Sequence		V	E	.	I	K	L	E	N	I	V	K	K	F	G	.	.	.	.	.	.	.	.	.	N	F	T	A	L	N	N	I	N	L	K	I	K	D	G	E	F	M	A	L	L	G	P	S	G	S	G	K	S	T	L	L	Y	T	I	A	G	I	Y	K	P	T	S	G	K	I	Y	F	D	E	K	D	V	T	E	L	P
Template Known Secondary structure				.											T	.	.	.	.	.	.	.	.	.	T													T	T									T	T	S	S										T	S	S			S							T	T				T	T	S
Template Predicted Secondary structure				.												.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.		.	.	.	.	.	.	10	.	.	.	.										.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Q	R	K	A	F	R	R	D	I	Q	M	V	F	Q	D	S	I	S	A	V	N	P	R	K	T	V	R	E	I	L	R	E	P	M	R	H	L	L	S	L	K	K	S	E	Q	L	A	R	A	S	E	M	L	K	A	V	D	L	D	D	S	V	L	D	K	R	P	P	Q	L	S	G	G	Q	L	Q	R	V
Query Conservation
Alig confidence					.	.	.	.	.												.	.																	.																									.
Template Conservation					.	.	.	.	.												.	.																	.																									.
Template Sequence		P	K	D	.	.	.	.	.	R	N	V	G	L	V	F	Q	N	W	A	.	.	L	Y	P	H	M	T	V	Y	K	N	I	A	F	P	L	E	.	L	R	K	A	P	R	E	E	I	D	K	K	V	R	E	V	A	K	M	L	H	I	D	K	.	L	L	N	R	Y	P	W	Q	L	S	G	G	Q	Q	Q	R	V
Template Known Secondary structure					.	.	.	.	.		T						T	T			.	.			T	T	S												.		T	T																	T	T		G	G	.	G	T	T	S		G	G	G	S
Template Predicted Secondary structure					.	.	.	.	.												.	.																	.																									.
Template SS confidence
		72	.	.						.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	A	R	A	L	A	V	E	P	K	L	L	I	L	D	E	A	V	S	N	L	D	L	V	L	Q	A	G	V	I	R	L	L	K	K	L	Q	Q	Q	F	G	T	A	C	L	F	I	T	H	D	L	R	L	V	E	R	F	C	Q	R	V	M	V	M	D	N	G	Q	I	V	E	T	Q	V	V	G	E	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	A	R	A	L	V	K	E	P	E	V	L	L	L	D	E	P	L	S	N	L	D	A	L	L	R	L	E	V	R	A	E	L	K	R	L	Q	K	E	L	G	I	T	T	V	Y	V	T	H	D	Q	A	E	A	L	A	M	A	D	R	I	A	V	I	R	E	G	E	I	L	Q	V	G	T	P	D	E	V	Y
Template Known Secondary structure								T	T			S						S	G	G	G	G	S																				T								S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		241	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	S	S	D	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	P	K	Y	K	F
Template Known Secondary structure			S		S	B
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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