Job Description P33594 Confidence 100.00% Date Thu Jan 5 11:52:19 GMT 2012 Rank 40 Aligned Residues 229 % Identity 24% Template c2ihyB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:abc transporter, atp-binding protein; PDBTitle: structure of the staphylococcus aureus putative atpase subunit of an2 atp-binding cassette (abc) transporter Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	N	I	S	G	L	S	H	H	Y	A	H	G	G	F	N	G	K	H	Q	H	Q	A	V	L	N	N	V	S	L	T	L	K	S	G	E	T	V	A	L	L	G	R	S	G	C	G	K	S	T	L	A	R	L	L	V	G	L	E	S	P	A	Q	G	N	I	S	W	R	G	E	P	L	A	K	L	N	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.																																																										.
Template Conservation															.	.	.	.	.	.	.	.	.																																																										.
Template Sequence		X	L	I	Q	L	D	Q	I	G	R	X	K	Q	.	.	.	.	.	.	.	.	.	G	K	T	I	L	K	K	I	S	W	Q	I	A	K	G	D	K	W	I	L	Y	G	L	N	G	A	G	K	T	T	L	L	N	I	L	N	A	Y	E	P	A	T	S	G	T	V	N	L	F	G	K	X	P	G	K	V	G	.
Template Known Secondary structure														T	.	.	.	.	.	.	.	.	.	T													T	T									T	T	S	S									T	T	S	S			S							T	T	B		T	T	S	T	T	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																																										.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.										.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		A	Q	R	K	A	F	R	R	D	I	Q	M	V	F	Q	D	S	I	S	A	V	N	P	R	K	T	V	R	E	I	L	R	E	P	M	R	.	.	.	H	L	L	S	L	K	K	S	E	Q	L	A	R	A	S	E	M	L	K	A	V	D	L	D	D	S	V	L	D	K	R	P	P	Q	L	S	G	G	Q	L	Q
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.																										.
Template Conservation																																																																		.
Template Sequence		Y	S	A	E	T	V	R	Q	H	I	G	F	V	S	H	S	L	L	E	K	F	Q	E	G	E	R	V	I	D	V	V	I	S	G	A	F	K	S	I	G	V	Y	Q	D	I	D	D	E	I	R	N	E	A	H	Q	L	L	K	L	V	G	X	S	A	.	K	A	Q	Q	Y	I	G	Y	L	S	T	G	E	K	Q
Template Known Secondary structure									T	T										T	T	S		T	T	S	B							T	T	T						S	S	S																	T	T		G	G	.	G	T	T	S	B	G	G	G	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		R	V	C	L	A	R	A	L	A	V	E	P	K	L	L	I	L	D	E	A	V	S	N	L	D	L	V	L	Q	A	G	V	I	R	L	L	K	K	L	Q	Q	Q	.	F	G	T	A	C	L	F	I	T	H	D	L	R	L	V	E	R	F	C	Q	R	V	M	V	M	D	N	G	Q	I	V	E	T	Q	V	V	G
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		R	V	X	I	A	R	A	L	X	G	Q	P	Q	V	L	I	L	D	E	P	A	A	G	L	D	F	I	A	R	E	S	L	L	S	I	L	D	S	L	S	D	S	Y	P	T	L	A	X	I	Y	V	T	H	F	I	E	E	I	T	A	N	F	S	K	I	L	L	L	K	D	G	Q	S	I	Q	Q	G	A	V	E
Template Known Secondary structure									T	T	T			S						S	T	T	T	T																					T	T								S		G	G	G			T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		238	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	L	T
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions