Job Description P33594 Confidence 97.68% Date Thu Jan 5 11:52:19 GMT 2012 Rank 117 Aligned Residues 159 % Identity 18% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	S	G	E	T	V	A	L	L	G	R	S	G	C	G	K	S	T	L	A	R	L	L	V	G	L	E	S	P	A	Q	G	N	I	S	W	R	G	E	P	L	A	K	L	N	R	A	Q	R	K	A	F	R	R	D	I	Q	M	V	F	Q	D	S	I	S	A	V	N	P	R	K	T	V	R	E	I	L	R	E
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I
Template Known Secondary structure				S	S	S							S	T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S		T	T	T	T			S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																																					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.
Predicted Secondary structure																																																																											.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.
Query Sequence		P	M	R	H	L	L	S	L	K	K	S	E	Q	L	A	R	A	S	E	M	L	K	A	V	D	L	D	D	S	V	L	D	K	R	P	P	Q	L	S	G	G	Q	L	Q	R	V	C	L	A	R	A	L	A	V	E	P	K	L	L	I	L	D	E	A	V	S	N	L	D	L	V	L	Q	.	.	.	.	.	A	G
Query Conservation																																																																											.	.	.	.	.
Alig confidence																																																																											.	.	.	.	.
Template Conservation
Template Sequence		D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	Q	R	F	G	L	D	P	D	D	A	L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	L	A	K
Template Known Secondary structure			S	S	S				G	G	G	G							T								G	G	G								S	T	T									T							S										T	T	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		V	I	R	L	L	K	K	L	Q	Q	Q	F	G	T	A	C	L	F	I	T	H	D	L	R	L	.	V	E	R	F	C	Q	R	V	M	V	M	D	N	G	Q
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		F	M	R	A	L	Q	R	L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	V	G	G	N	I	M	A	H	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																																	S									S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions