Return to main results Retrieve Phyre Job Id

Job DescriptionP77768
Confidence54.21%DateThu Jan 5 12:32:41 GMT 2012
Rank19Aligned Residues30
% Identity3%Templatec2rnjA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:response regulator protein vrar; PDBTitle: nmr structure of the s. aureus vrar dna binding domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290..
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  ALRIAQEMLDRGLDRELVMMVTRLSPDDLI
Query Conservation      
  

  
   
 

  
 

 



Alig confidence 





























Template Conservation   
  

  
  
    


  
 

  

 
Template Sequence  REMEILLLIAKGYSNQEIASASHITIKTVK
Template Known Secondary structure  TT

TTT

Template Predicted Secondary structure 






Template SS confidence 





























   151........160.........170.........180
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions