Job Description P76396 Confidence 99.53% Date Thu Jan 5 12:22:36 GMT 2012 Rank 25 Aligned Residues 139 % Identity 12% Template d1jeyb2 SCOP info vWA-like vWA-like Ku80 subunit N-terminal domain Resolution 2.50

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																	.	.	70	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	C	P	C	I	L	L	L	D	V	S	G	S	M	N	G	.	.	.	.	.	.	R	P	I	N	E	L	N	A	G	L	V	T	F	R	D	E	L	L	A	D	P	L	A	L	K	R	V	E	L	G	I	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	P	V	H	V	E	Q
Query Conservation																			.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	A	A	V	V	L	C	M	D	V	G	F	T	M	S	N	S	I	P	G	I	E	S	P	F	E	Q	A	K	K	V	I	T	M	F	V	Q	R	Q	V	F	A	E	N	K	D	E	I	A	L	V	L	F	G	T	D	G	T	D	N	P	L	S	G	G	D	Q	Y	Q	N	I	T	V	H	R	H	L	M	L
Template Known Secondary structure														G	G	G	G			B	T	T	B																					T	T											S		S	S		B	S	T	T		T	T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		P	F	T	S	A	A	N	F	F	P	P	I	L	F	A	Q	.	G	D	T	P	M	G	A	A	I	T	K	A	L	D	M	V	E	E	R	K	R	E	Y	R	A	N	G	I	S	Y	Y	R	P	W	I	F	L	I	T	D	G	A	P	T	D	E	W	Q	A	A	A	N	K	V	F	R	G	E	E	D	K	R	F
Query Conservation																		.
Alig confidence																		.																							.	.	.	.	.																							.
Template Conservation																																									.	.	.	.	.																							.
Template Sequence		P	D	F	D	L	L	E	D	I	E	S	K	I	Q	P	G	S	Q	Q	A	D	F	L	D	A	L	I	V	S	M	D	V	I	Q	H	E	T	I	G	.	.	.	.	.	K	K	F	E	K	R	H	I	E	I	F	T	D	L	S	S	R	F	S	K	S	Q	.	L	D	I	I	I	H	S	L	K	K	C	D	I
Template Known Secondary structure												T	T					S	S																			S	S	S	.	.	.	.	.	S			S												S					T	T	.											T	T
Template Predicted Secondary structure																																									.	.	.	.	.																							.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	F	S	I	G	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	Q	F	F	L	P	F
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions