Return to main results Retrieve Phyre Job Id

Job DescriptionP76396
Confidence3.60%DateThu Jan 5 12:22:36 GMT 2012
Rank98Aligned Residues59
% Identity7%Templatec3l2oB_
PDB info PDB header:protein binding/cell cycleChain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80...
Predicted Secondary structure 























Query SS confidence 





























































Query Sequence  CILLLDVSGSMNGRPINELNAGLVTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANF
Query Conservation 





 



        
 
    
  
                                
Alig confidence 







...


















































Template Conservation 







...
  

 
     

             




 




   
    

   
Template Sequence  FIYVANAE. . . AHKRHEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHE
Template Known Secondary structure 

B
B...TT





TT

SSTTS
B

Template Predicted Secondary structure 

...



















Template SS confidence 





























































   289290...... ...300.........310.........320.........330.........340.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions