Job Description P76396 Confidence 98.46% Date Thu Jan 5 12:22:36 GMT 2012 Rank 35 Aligned Residues 120 % Identity 15% Template c3k6sB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-2; PDBTitle: structure of integrin alphaxbeta2 ectodomain Resolution 3.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	S	N	P	E	P	R	C	P	C	I	L	L	L	D	V	S	G	S	M	N	G	R	P	I	N	E	L	N	A	G	L	V	T	F	R	D	E	L	L	A	D	P	L	A	L	K	R	V	E	L	G	I	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		F	R	R	A	K	G	Y	P	I	D	L	Y	Y	L	M	D	L	S	Y	S	M	.	L	D	D	L	R	N	V	K	K	L	G	G	D	L	L	R	A	L	N	E	I	T	E	S	G	R	I	G	F	G	S	F	V	D	K	T	V	L	P	F	V	N	T	H	P	D	K	L	R	N	P	C	P	N	K	E	K	E
Template Known Secondary structure																			S	S	T	T	.						T	T	T	T			T	T							S	S			S												S	S	T	T	S	S			S	S	T	T	T	T					S
Template Predicted Secondary structure																							.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
								68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	F	G	P	V	H	V	E	Q	P	F	T	S	A	A	N	F	F	P	P	I	L	F	A	Q	G	D	T	P	M	G	A	A	I	T	K	A	L	D	M	V	E	E	R	K	R	E	Y	R	A	N	G	I	S	Y	Y	R	P	W	I	F	L	I	T	D	G	A	P	T
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																			.	.	.
Template Conservation																																																										.	.	.
Template Sequence		C	Q	P	P	F	A	F	R	H	V	L	K	L	T	N	N	S	N	Q	F	Q	T	E	V	G	K	Q	L	I	S	G	N	L	D	A	P	E	G	G	L	D	A	M	M	Q	V	A	A	C	P	E	E	I	G	W	R	.	.	.	N	V	T	R	L	L	V	F	A	T	D	D	G	F	H
Template Known Secondary structure							S									S		S									T	S						S	S	S	S											T	T									.	.	.	S	S									S	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions