Job Description P76396 Confidence 99.67% Date Thu Jan 5 12:22:36 GMT 2012 Rank 21 Aligned Residues 151 % Identity 13% Template c2x5nA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn10; PDBTitle: crystal structure of the sprpn10 vwa domain Resolution 1.30 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																																					.	.
Query SS confidence																.	.	.	.	.																																					.	.
Query Sequence		C	I	L	L	L	D	V	S	G	S	M	N	G	R	.	.	.	.	.	P	I	N	E	L	N	A	G	L	V	T	F	R	D	E	L	L	A	D	P	L	A	L	K	R	V	E	L	G	I	V	T	F	G	P	V	.	.	H	V	E	Q	P	F	T	S	A	A	N	F	F	P	P	I	L	F	A	Q	G	D	T
Query Conservation																.	.	.	.	.																																					.	.
Alig confidence																.	.	.	.	.																																					.	.
Template Conservation
Template Sequence		T	M	I	L	I	D	N	S	E	W	M	I	N	G	D	Y	I	P	T	R	F	E	A	Q	K	D	T	V	H	M	I	F	N	Q	K	I	N	D	N	P	E	N	M	C	G	L	M	T	I	G	D	N	S	P	Q	V	L	S	T	L	T	R	D	Y	G	K	F	L	S	A	M	H	D	L	P	V	R	G	N	A
Template Known Secondary structure									S	G	G	G	G		T	T	S	S	S																						T	T										T	T	S									S										T	T					S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		P	M	G	A	A	I	T	K	A	L	D	M	V	E	E	R	K	R	E	Y	R	A	N	G	I	S	Y	Y	R	P	W	I	F	L	I	T	D	G	A	P	T	D	E	W	Q	A	A	A	N	K	V	F	R	G	E	E	D	K	R	F	A	F	F	S	I	G	V	Q	.	.	G	A	D	M	K	T	L	A	Q	I
Query Conservation																																																																						.	.
Alig confidence																					.	.	.	.	.	.	.																		.																									.	.
Template Conservation																					.	.	.	.	.	.	.																		.
Template Sequence		K	F	G	D	G	I	Q	I	A	Q	L	A	L	K	H	R	E	N	K	.	.	.	.	.	.	.	I	Q	R	Q	R	I	V	A	F	V	G	S	P	I	V	E	D	.	E	K	N	L	I	R	L	A	K	R	M	K	K	N	N	V	A	I	D	I	I	H	I	G	E	L	S	A	L	Q	H	F	I	D	A	A
Template Known Secondary structure																T		S		T	.	.	.	.	.	.	.	T	S										S			S	S		.														T	T									S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																		.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	R	Q	P	L	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	S	D	S	C	H	L
Template Known Secondary structure			S	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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