Job Description P76396 Confidence 99.90% Date Thu Jan 5 12:22:36 GMT 2012 Rank 2 Aligned Residues 197 % Identity 13% Template c2ok5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: human complement factor b Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		A	S	N	P	E	P	R	C	P	C	I	L	L	L	D	V	S	G	S	M	N	G	R	P	I	N	E	L	N	A	G	L	V	T	F	R	D	E	L	L	A	D	P	L	A	L	K	R	V	E	L	G	I	V	T	F	G	P	V	H	V	E	Q	P	.	.	.	.	.	F	T	S	A	A	N	F	F	P	P	I
Query Conservation																																																																		.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.
Template Conservation
Template Sequence		V	L	D	P	S	G	S	M	N	I	Y	L	V	L	D	G	S	D	S	I	G	A	S	N	F	T	G	A	K	K	C	L	V	N	L	I	E	K	V	A	S	Y	G	V	K	P	R	Y	G	L	V	T	Y	A	T	Y	P	K	I	W	V	K	V	S	E	A	D	S	S	N	A	D	W	V	T	K	Q	L	N	E
Template Known Secondary structure					T	T												S	S	S	T	T																				T	T	T											S	S	S							T	T	S	T	T	T	T											T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.										.	150	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.														.	.	.	.	.	.	.	.	.
Query Sequence		L	F	A	Q	G	D	T	P	M	G	A	A	I	T	K	A	L	D	M	V	E	E	R	K	R	E	Y	R	A	N	G	I	S	Y	Y	R	P	W	I	F	L	I	T	D	G	A	P	T	.	.	D	E	W	Q	A	A	A	N	K	V	F	R	G	.	.	.	.	.	.	.	.	.	E	E	D	K	R	F	A	F
Query Conservation																																																		.	.														.	.	.	.	.	.	.	.	.
Alig confidence							.																						.	.	.	.																		.	.														.	.	.	.	.	.	.	.	.
Template Conservation							.																						.	.	.	.
Template Sequence		I	N	Y	E	G	.	T	N	T	K	K	A	L	Q	A	V	Y	S	M	M	S	W	V	P	P	E	G	.	.	.	.	W	N	R	T	R	H	V	I	I	L	M	T	D	G	L	H	N	M	G	G	D	P	I	T	V	I	D	E	I	R	D	L	L	Y	I	G	K	D	R	K	N	P	R	E	D	Y	L	D	V
Template Known Secondary structure							.	B																			T	T	.	.	.	.	G	G	G										S				B		S	S		T											T	T		S	S		T	T				G	G	G
Template Predicted Secondary structure							.																						.	.	.	.
Template SS confidence
		317	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		157	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																.	.	.
Query SS confidence								.																.	.	.
Query Sequence		F	S	I	G	V	Q	.	G	A	D	M	K	T	L	A	Q	I	S	V	R	Q	P	.	.	.	L	P	L	Q	G	L	Q	F	R	E	L	F	S	W	L	S	S	S	L	R	S	V	S	R	S	T	P	G	T	E	V	V	L	E	A	P	K	G	W	T	S
Query Conservation								.																.	.	.
Alig confidence								.																.	.	.											.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		Y	V	F	G	V	G	P	L	V	N	Q	V	N	I	N	A	L	A	S	K	K	D	N	E	Q	H	V	F	K	V	K	D	M	E	N	.	.	.	.	L	E	D	V	F	Y	Q	M	I	D	E	S	Q	S	L	S	L	C	G	M	V	W	E	H	R	K	G
Template Known Secondary structure							S	T	T	S									S				T	T								S					.	.	.	.											T	T	S		T	T	S	T	T						T	T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.					.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions