Job Description P76396 Confidence 98.79% Date Thu Jan 5 12:22:36 GMT 2012 Rank 34 Aligned Residues 142 % Identity 15% Template c2nvoA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:ro sixty-related protein, rsr; PDBTitle: crystal structure of deinococcus radiodurans ro (rsr) protein Resolution 1.89 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		T	S	D	F	A	S	N	P	E	P	R	C	P	C	I	L	L	L	D	V	S	G	S	M	N	G	R	.	.	.	.	.	P	I	N	E	L	N	A	G	L	V	T	F	R	D	E	L	L	A	D	P	L	A	L	K	R	V	E	L	G	I	V	T	F	G	P	V	H	V	E	Q	P	F	T	S	A	A	N	F
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.
Template Conservation
Template Sequence		T	L	A	F	G	N	V	Q	P	A	N	T	R	H	L	L	A	L	D	V	S	G	S	M	T	C	G	D	V	A	G	V	P	G	L	T	P	N	M	A	A	A	A	M	S	L	I	A	L	R	T	E	P	D	A	L	T	M	G	F	A	E	Q	F	R	P	L	G	I	T	P	R	D	T	L	E	S	A	M	Q
Template Known Secondary structure					G	G	G						S									S	G	G	G	G	S			G	G	G		T	T																		S	S								B	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		F	P	P	I	L	F	A	Q	G	D	T	P	M	G	A	A	I	T	K	A	L	D	M	V	E	E	R	K	R	E	Y	R	A	N	G	I	S	Y	Y	R	P	W	I	F	L	I	T	D	G	A	P	T	D	E	W	Q	A	A	A	N	K	V	F	R	.	.	G	E	E	D	K	R	F	A	F	F	S	I	G	V
Query Conservation																																																																		.	.
Alig confidence								.																.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation								.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	Q	S	V	S	.	F	G	G	T	D	C	A	Q	P	I	L	W	A	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	L	D	V	D	T	F	V	V	Y	T	D	N	E	T	W	A	G	Q	V	H	P	T	V	A	L	D	Q	Y	A	Q	K	M	G	R	A	P	K	L	I	V	V	G	L
Template Known Secondary structure			T			S	S	.	B					T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				S							S	S						S	S														S										T
Template Predicted Secondary structure								.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		429	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.														450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
		162	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	T
Template Known Secondary structure		T		S
Template Predicted Secondary structure
Template SS confidence
		495	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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