Job Description P76396 Confidence 99.61% Date Thu Jan 5 12:22:36 GMT 2012 Rank 23 Aligned Residues 178 % Identity 11% Template c2iueA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:pactolus i-domain; PDBTitle: pactolus i-domain: functional switching of the rossmann2 fold Resolution UNK

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		E	P	R	C	P	C	I	L	L	L	D	V	S	G	S	M	N	G	R	P	I	N	E	L	N	A	G	L	V	T	F	R	D	E	L	L	A	D	P	L	A	L	K	R	V	E	L	G	I	V	T	F	G	P	.	.	V	H	V	E	Q	P	F	T	S	A	A	N	F	F	P	P	I	L	F	A	Q	G	D	T
Query Conservation																																																								.	.
Alig confidence																				.																																				.	.
Template Conservation																				.
Template Sequence		D	N	S	V	D	L	Y	F	L	M	G	L	S	G	S	A	Q	G	.	H	L	S	N	V	Q	T	L	G	S	D	L	L	K	A	L	N	E	I	S	R	S	G	R	I	G	F	G	S	I	V	N	M	T	F	Q	H	I	L	K	L	T	A	D	S	S	Q	F	Q	R	E	L	R	K	Q	L	V	S	G	K	L
Template Known Secondary structure															G	G	G	T	T	.	T																				S										S	S	S										S											T							S
Template Predicted Secondary structure																				.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																														.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	G	A	A	I	T	K	A	L	D	M	V	E	E	R	K	R	E	Y	R	A	N	G	I	S	Y	Y	R	P	W	I	F	L	I	T	D	G	A	P	T	D	E	W	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	N	K	V
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.
Template Sequence		A	T	P	K	G	Q	L	D	A	V	V	Q	V	A	I	C	L	G	E	I	G	.	.	.	W	R	N	G	T	R	F	L	V	L	V	T	D	N	D	F	H	L	A	K	D	K	T	L	G	T	R	Q	N	T	S	D	G	R	C	H	L	D	D	G	M	Y	R	S	R	G	E	P	D	Y	Q	S	V	V	Q	L
Template Known Secondary structure		S	S	S	B																	T	.	.	.			S	S									S	S		B			T	T	G	G	G	G	G	T			S				S	S			B	S	S	S	B	B	G	G	G	G	S	S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		F	R	G	E	E	D	K	R	F	A	F	F	S	I	G	V	Q	G	A	D	M	K	T	L	A	Q	I	S	.	.	.	V	R	Q	P	L	P	L	Q	G	L	Q	F	R	E	L	F	S	W	L	S	S	S	L	R	S	V
Query Conservation																														.	.	.
Alig confidence														.																.	.	.
Template Conservation														.
Template Sequence		A	S	K	L	A	E	N	N	I	Q	P	I	.	F	V	V	P	S	R	M	V	K	T	Y	E	K	L	T	T	F	I	P	K	L	T	I	G	E	L	S	D	D	S	S	N	V	A	Q	L	I	R	N	A	Y	S	K	L
Template Known Secondary structure									T					.																		S	T	T							S	S															T
Template Predicted Secondary structure														.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions