Job Description P76396 Confidence 99.90% Date Thu Jan 5 12:22:36 GMT 2012 Rank 3 Aligned Residues 181 % Identity 15% Template c1rs0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: crystal structure analysis of the bb segment of factor b2 complexed with di-isopropyl-phosphate (dip) Resolution 2.60 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																											.	.	.	.	.																.	.	.
Query SS confidence																																																											.	.	.	.	.																.	.	.
Query Sequence		C	P	C	I	L	L	L	D	V	S	G	S	M	N	G	R	P	I	N	E	L	N	A	G	L	V	T	F	R	D	E	L	L	A	D	P	L	A	L	K	R	V	E	L	G	I	V	T	F	G	P	V	H	V	E	Q	P	.	.	.	.	.	F	T	S	A	A	N	F	F	P	P	I	L	F	A	Q	.	.	.
Query Conservation																																																											.	.	.	.	.																.	.	.
Alig confidence																																																											.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		M	N	I	Y	L	V	L	D	G	S	D	S	I	G	A	S	N	F	T	G	A	K	K	V	L	V	N	L	I	E	K	V	A	S	Y	G	V	K	P	R	Y	G	L	V	T	Y	A	T	Y	P	K	I	W	V	K	V	S	E	A	D	S	S	N	A	D	W	V	T	K	Q	L	N	E	I	N	Y	E	D	H	K
Template Known Secondary structure											S	T	T	T																						T	T											S	S	S							T	T	S	G	G	G	G														G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
				92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.									.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																													.	.														.	.	.	.	.	.	.	.
Query SS confidence		.	.																																													.	.														.	.	.	.	.	.	.	.
Query Sequence		.	.	G	D	T	P	M	G	A	A	I	T	K	A	L	D	M	V	E	E	R	K	R	E	Y	R	A	N	G	I	S	Y	Y	R	P	W	I	F	L	I	T	D	G	A	P	T	.	.	D	E	W	Q	A	A	A	N	K	V	F	R	G	.	.	.	.	.	.	.	.	E	E	D	K	R	F	A	F	F	S	I
Query Conservation		.	.																																													.	.														.	.	.	.	.	.	.	.
Alig confidence		.	.																.	.	.	.	.	.	.																							.	.														.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		L	K	S	G	T	N	T	K	K	A	L	Q	A	V	Y	S	M	.	.	.	.	.	.	.	M	S	W	P	G	W	N	R	T	R	H	V	I	I	L	M	T	D	G	L	H	N	M	G	G	D	P	I	T	V	I	D	E	I	R	D	L	L	Y	I	G	K	D	R	N	P	R	E	D	Y	L	D	V	Y	V	F
Template Known Secondary structure			T	T															.	.	.	.	.	.	.						G	G	G											S				S	S	S		T											T	T		S	S						G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340								.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.
Predicted Secondary structure					.																	.	.	.																					.
Query SS confidence					.																	.	.	.																					.
Query Sequence		G	V	Q	.	G	A	D	M	K	T	L	A	Q	I	S	V	R	Q	P	L	.	.	.	P	L	Q	G	L	Q	F	R	E	L	F	S	W	L	S	S	S	L	R	S	.	V	S	R	S	T	P	G	T	E
Query Conservation					.																	.	.	.																					.
Alig confidence					.																	.	.	.																					.
Template Conservation
Template Sequence		G	V	G	P	L	V	N	Q	V	N	I	N	A	L	A	S	K	K	D	N	E	Q	H	V	C	K	V	K	D	M	E	C	L	E	D	V	F	Y	Q	M	I	D	E	S	Q	S	L	S	L	C	G	M	V
Template Known Secondary structure				S	S	S										S				T	T							T	T													S		G	G	G	G	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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