Job Description P0A9D8 Confidence 100.00% Date Thu Jan 5 11:09:57 GMT 2012 Rank 1 Aligned Residues 274 % Identity 95% Template d3tdta_ SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	Q	L	Q	N	I	I	E	T	A	F	E	R	R	A	E	I	T	P	A	N	A	D	T	V	T	R	E	A	V	N	Q	V	I	A	L	L	D	S	G	A	L	R	V	A	E	K	I	D	G	Q	W	V	T	H	Q	W	L	K	K	A	V	L	L	S	F	R	I	N	D	N	Q	V	I	E	G	A	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Q	Q	L	Q	N	V	I	E	S	A	F	E	R	R	A	D	I	T	P	A	N	V	D	T	V	T	R	E	A	V	N	Q	V	I	G	L	L	D	S	G	A	L	R	V	A	E	K	I	D	G	Q	W	V	T	H	Q	W	L	K	K	A	V	L	L	S	F	R	I	N	D	N	K	V	M	D	G	A	E	T
Template Known Secondary structure															T	G	G	G			T	T	T																			T	S	S		S					T	T																											S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	F	D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	A	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	S	Y	V	N	I	G	A	Y	V	D	E	G	T	M	V	D	T	W	A	T	V	G	S	C	A	Q	I	G	K	N	V	H	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	Y	D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	T	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	S	Y	V	N	I	G	A	Y	V	D	E	G	T	M	V	D	T	W	A	T	V	G	S	C	A	Q	I	G	K	N	V	H	L	S	G
Template Known Secondary structure						S	S		B	T	T	T	T															T	T				B	T	T					T	T					S					T	T					T	T					T	T					T	T					T	T					T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	I	G	G	V	L	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	I	G	Q	S	T	R	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V	V	V	S	G	N	L	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	G	I	G	G	V	L	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	L	G	Q	S	T	R	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V	V	V	S	G	N	L	P	S
Template Known Secondary structure		T						S	B	T	T	B		S	S						T	T					T	T					T	T					T	T					T	T					T	T						T	T	T					S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	G	K	Y	S	L	Y	C	A	V	I	V	K	K	V	D	A	K	T	R	G	K	V	G	I	N	E	L	L	R	T	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	G	S	Y	S	L	Y	C	A	V	I	V	K	K	V	D	A	K	T	R	G	K	V	G	I	N	E	L	L	R	T	I	D
Template Known Secondary structure		T	T	S	S																								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions