Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9D8
Confidence99.75%DateThu Jan 5 11:09:57 GMT 2012
Rank44Aligned Residues126
% Identity21%Templated1xata_
SCOP infoSingle-stranded left-handed beta-helix Trimeric LpxA-like enzymes Galactoside acetyltransferase-like
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120...... ...130.........140.........150.. .......160....
Predicted Secondary structure 













.....















...







........
Query SS confidence 

























. . . . .

























. . .











. . . . . . . .
Query Sequence  EGFRVVPPAAVRQGAFIARNTVLMPS. . . . . YVNIGAYVDEGTMVDTWATVGSCAQI. . . GKNVHLSGGVGI. . . . . . . .
Query Conservation   

 
 
 
 
   
 

    
   ..... 
   
 

  
 
     

    
...
  
 
     
........
Alig confidence 

























.....

























...











........
Template Conservation     
   

 

  
 
                         
 

    
     
   
   
               
Template Sequence  SEQVSNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHE
Template Known Secondary structure  TTT


TT
TT


TTT


GGGGT

SS
SSS


SS

TT

STTTT

TTSS

S
GGG

S
Template Predicted Secondary structure 













































Template SS confidence 















































































   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   165....170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure  .....
















































Query SS confidence  . . . . .



































































Query Sequence  . . . . . GGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSV
Query Conservation  .....
            


   

    
  
  

    

 
  
     
 
   
    
 


  
Alig confidence  .....























































......





Template Conservation                
 
 

  
 

    
  

 

 














   

 
...... 


 
Template Sequence  EPAFAGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGG. . . . . . NPARTI
Template Known Secondary structure 
GGGGG










TT

TT

TT

TT

TT

S
B
TTT......TTT
Template Predicted Secondary structure 










































......



Template SS confidence 








































































   95....100.........110.........120.........130.........140.........150..... ....160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions