Job Description P0A9D8 Confidence 99.88% Date Thu Jan 5 11:09:57 GMT 2012 Rank 28 Aligned Residues 142 % Identity 20% Template d1mr7a_ SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes Galactoside acetyltransferase-like Resolution 1.80

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	E	G	F	R	V	V	P	P	A	A	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	S	Y	V	N	I	G	A	Y	V	D	E	G	T	M	V	D	T	W	A	T	V	G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		N	K	S	V	Q	F	I	K	P	I	L	E	K	L	E	N	V	E	V	G	E	Y	S	Y	Y	D	.	.	.	.	S	K	N	G	E	T	F	D	K	Q	I	L	Y	H	Y	P	I	L	N	D	K	L	K	I	G	K	F	C	S	I	G	P	G	V	T	I	I	M	N	G	A	N	H	R	M	D	G	S	T	Y
Template Known Secondary structure				S									T	T	S	T	T					T	T					.	.	.	.		S	S	S			G	G	G	G			S			G	G	G								S	S					T	T						G	G	G					S	S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																			169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	I	G	Q	S	T	R	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	N	L	F	G	N	G	W	E	K	H	M	P	K	L	D	Q	L	P	I	K	G	D	T	I	I	G	N	D	V	W	I	G	K	D	V	V	I	M	P	G	V	K	I	G	D	G	A	I	V	A	A	N	S	V	V	V	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	P	Y	M
Template Known Secondary structure			G	G	G	G		T	T	G	G	G	G				G	G	G	S										S	S					T	T					T	T					T	T					T	T					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																150	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.															.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	V	S	G	N	L	P	S	K	D	G	K	Y	S	L	Y	C	A	V	I	V	K	K	V	D	A	K	T	R	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	N	E	L	L	R	T	I
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.										.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		L	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	N	P	A	N	E	I	K	Q	R	.	.	F	D	Q	D	T	I	N	Q	L	L	D	I	K	W	W	N	W	P	I	D	I	I	N	E	N	I	D	K	I
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	T	T							S	.	.	S													G	G	G	S								T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		155	.	.	.													.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions