 |
Job Description | P0A9D8 | Confidence | 1.84% | Date | Thu Jan 5 11:09:57 GMT 2012 |
Rank | 91 | Aligned Residues | 62 |
% Identity | 18% | Template | d1au7a2 |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| POU-specific domain
|
Resolution | 2.30 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | Q | L | Q | N | I | I | E | T | A | F | E | R | R | A | E | I | T | P | A | N | A | D | T | V | T | R | E | A | V | N | Q | . |
. |
. |
. |
. |
. |
. |
V | I | A | L | L | D | S | G | A | L | R | V | A | E | K | I | D | G | Q | W | V | T | H | Q | W | L | K | K | A |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|
Template Sequence |   |
M | R | A | L | E | Q | F | A | N | E | F | K | V | R | R | I | K | L | G | Y | T | Q | T | N | V | G | E | A | L | A | A | V | H | G | S | E | F | S | Q | T | T | I | C | R | F | E | N | L | Q | L | S | F | K | N | A | C | K | L | K | A | I | L | S | K | W | L | E | E | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|
|  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|