Job Description P0A9D8 Confidence 99.69% Date Thu Jan 5 11:09:57 GMT 2012 Rank 50 Aligned Residues 155 % Identity 16% Template c3kwdA_ PDB info PDB header:lyase, protein binding, photosynthesis Chain: A: PDB Molecule:carbon dioxide concentrating mechanism protein; PDBTitle: inactive truncation of the beta-carboxysomal gamma-carbonic anhydrase,2 ccmm, form 1 Resolution 1.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																						.																.	.	.	.
Query SS confidence																						.																.	.	.	.
Query Sequence		V	P	P	A	A	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	.	S	Y	V	N	I	G	A	Y	V	D	E	G	T	M	V	.	.	.	.	D	T	W	A	T	V	G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	P	L	Q	A	N	P	T	I	I	E	D
Query Conservation																						.																.	.	.	.
Alig confidence																						.																.	.	.	.
Template Conservation
Template Sequence		L	A	E	P	E	I	A	P	T	A	Y	V	H	S	F	S	N	L	I	G	D	V	R	I	K	D	Y	V	H	I	A	P	G	T	S	I	R	A	D	E	G	T	P	F	H	I	G	S	R	T	N	I	Q	D	G	V	V	I	H	G	L	Q	Q	G	R	V	I	G	D	D	G	Q	E	Y	S	V	W	I	G	D
Template Known Secondary structure									T	T					T	T	S					S					T	T					T	T						S	S	S							T	T					T	T							S	S						T	T	S				S					T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	I	G	Q	S	T	R	I	Y	D	R	E	T	G	E	.	.	.	I	H	Y	G	R	V	P	A	G	S	V	V	V	S	G	N	L	P	S	K	D	G	K	Y	S	L	Y	C	A	V	I	V	K	K	V	D
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.																			.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		N	V	S	I	T	H	M	A	L	I	H	G	P	A	Y	I	G	D	G	C	F	I	G	F	R	S	T	V	F	N	A	R	V	G	A	G	C	V	V	M	M	H	V	L	I	Q	D	V	E	I	P	P	G	K	Y	V	P	S	G	M	V	I	.	.	.	.	.	T	T	Q	Q	Q	A	D	R	L	P	N	V	E
Template Known Secondary structure		T					T	T											T	T					T	T										T	T					S	S					S					T	T	B				T	T				.	.	.	.	.		S					T	T			B
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.
		258	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	T	R	G	K	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	D	I	H	F	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions