Job Description P0A9D8 Confidence 99.88% Date Thu Jan 5 11:09:57 GMT 2012 Rank 25 Aligned Residues 189 % Identity 15% Template c3jqyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:polysialic acid o-acetyltransferase; PDBTitle: crystal strucutre of the polysia specific acetyltransferase neuo Resolution 1.70 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.
Predicted Secondary structure																																													.	.	.	.															.									.	.
Query SS confidence																																													.	.	.	.															.									.	.
Query Sequence		I	N	D	N	Q	V	I	E	G	A	E	S	R	Y	F	D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	A	V	.	.	.	.	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	.	S	Y	V	N	I	G	A	Y	.	.	V	D	E	G	T	M	V	D
Query Conservation																																													.	.	.	.															.									.	.
Alig confidence																																													.	.	.	.															.									.	.
Template Conservation
Template Sequence		N	G	S	G	N	V	F	V	C	G	D	L	V	N	S	K	E	N	K	V	Q	F	N	G	N	N	N	K	L	I	I	E	D	D	V	E	C	R	W	L	T	V	I	F	R	G	D	N	N	Y	V	R	I	H	K	N	S	K	I	K	G	D	I	V	A	T	K	G	S	K	V	I	I	G	R	R	T	T	I	G
Template Known Secondary structure			S	S	S									S	S		B	S							S	S	S							T	T												S	S	S							T	T											S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		142	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	W	A	T	V	.	.	.	G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	P	L	Q	.	.	.	.	.	.	.	.	.	.	.	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y
Query Conservation							.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	F	E	V	V	T	D	K	C	N	V	T	I	G	H	D	C	M	I	A	R	D	V	I	L	R	A	S	D	G	H	P	I	F	D	I	H	S	K	K	R	I	N	W	A	K	D	I	I	I	S	S	Y	V	W	V	G	R	N	V	S	I	M	K	G	V	S	V	G	S	G	S	V	I	G	Y	G	S	I
Template Known Secondary structure		T	T						S	S	S						T	T					S	S						S		S	S			B		T	T	T			B											S	S					S	S					T	T					T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	Q	S	T	R	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V	V	V	S	G	N	L	P	S	K	D	G	K	Y	S	L	Y	C	A	V	I	V	K	K	V	D	A	K	T	R	G	K	V	G	I	N	E	L	L	R	T	I
Query Conservation
Alig confidence															.	.	.	.	.	.					.	.	.	.	.	.	.											.	.	.
Template Conservation															.	.	.	.	.	.					.	.	.	.	.	.	.											.	.	.
Template Sequence		V	T	K	D	V	P	S	M	C	A	A	A	G	.	.	.	.	.	.	N	P	A	K	.	.	.	.	.	.	.	I	I	K	R	N	I	I	W	A	R	.	.	.	T	D	K	A	E	L	I	S	D	D	K	R	C	S	S	Y	H	A	K	L	T	Q	L
Template Known Secondary structure				S		B		T	T						.	.	.	.	.	.	T	T			.	.	.	.	.	.	.					S					S	.	.	.		T	T			S	G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.					.	.	.	.	.	.	.											.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.								.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions