 |
| Job Description | P0A9D8 | | Confidence | 2.02% | Date | Thu Jan 5 11:09:57 GMT 2012 |
| Rank | 87 | Aligned Residues | 30 |
| % Identity | 23% | Template | c3izca_ |
| PDB info |
PDB header:ribosome | Chain: A: PDB Molecule:60s ribosomal protein rpl1 (l1p); |
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
|
| Resolution | NULL Å |
|
| | |
234 | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
| Predicted Secondary structure | |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
| | | | | |
|
|  | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | S | G | N | L | P | S | K | D | G | K | Y | S | L | Y | C | A | V | I | V | K | K | V | D | A | K | T | R | G | K |
| Query Conservation | |
| |
| | | | | | | | | | | | | |
| |
| | | | | |
| | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
| |
|
|
|
|
|
|
|
|
|
|
|
| | |
| |
|
| | | |
| Template Sequence | |
A | G | K | V | A | V | V | V | R | G | R | Y | A | G | K | K | V | V | I | V | K | P | H | D | E | G | S | K | S | H |
| Template Known Secondary structure | |
|
|
|
|
| B |
|
|
| S | S | S | S |
|
| B |
| B |
|
|
|
| S | S | S |
| S |
|
| S |
| Template Predicted Secondary structure | |
|
| | | | | | |
|
|
|
|
|
| | | | | | | | |
|
|
|
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
