Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9D8
Confidence2.34%DateThu Jan 5 11:09:57 GMT 2012
Rank73Aligned Residues22
% Identity32%Templatec3iz5a_
PDB info PDB header:ribosomeChain: A: PDB Molecule:60s ribosomal protein l1 (l1p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260...
Predicted Secondary structure 










Query SS confidence 





















Query Sequence  DGKYSLYCAVIVKKVDAKTRGK
Query Conservation          
 
     
     
Alig confidence 





















Template Conservation   











  
 

   
Template Sequence  QGRFAGRKAVIVRVFEEGTRDR
Template Known Secondary structure 
SSSS



B
S

SSSSS
S
Template Predicted Secondary structure 













Template SS confidence 





















   15....20.........30......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions