Job Description P0A9D8 Confidence 99.94% Date Thu Jan 5 11:09:57 GMT 2012 Rank 13 Aligned Residues 212 % Identity 14% Template c3i3aC_ PDB info PDB header:transferase Chain: C: PDB Molecule:acyl-[acyl-carrier-protein]--udp-n- PDBTitle: structural basis for the sugar nucleotide and acyl chain2 selectivity of leptospira interrogans lpxa Resolution 2.12 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	I	D	G	Q	W	V	T	H	Q	W	L	K	K	A	V	L	L	S	F	R	I	N	D	N	Q	V	I	E	G	A	E	S	R	Y	F	D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		M	K	I	H	P	T	A	I	I	D	P	K	A	.	.	E	L	H	E	S	V	E	V	G	P	Y	S	I	I	E	G	N	V	S	I	Q	E	G	T	I	I	E	G	H	V	K	I	C	A	G	S	E	I	G	K	F	N	R	F	H	Q	G	A	V	I	G	V	M	P	Q	D	L	G	F	N	Q	Q	L	L	T
Template Known Secondary structure						T	T					T	T		.	.				T	T					T	T					S	S					T	T					T	T					T	T					S	S					T	T								S		T	T			T	T	S
Template Predicted Secondary structure															.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
					111	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																.
Query SS confidence		.	.	.																.
Query Sequence		.	.	.	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	.	S	Y	V	N	I	G	A	Y	V	D	E	G	T	M	V	D	T	W	A	T	V	G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A
Query Conservation		.	.	.																.
Alig confidence		.	.	.																.																																										.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.
Template Sequence		K	T	V	I	G	D	H	N	I	F	R	E	Y	S	N	I	H	K	G	T	K	E	D	S	P	T	V	I	G	N	K	N	Y	F	M	G	N	S	H	V	G	H	D	C	I	L	G	N	N	N	I	L	T	H	G	A	V	L	A	G	.	.	.	.	.	.	.	.	H	V	T	L	G	N	F	A	F	I	S	G
Template Known Secondary structure							S	S					T	T							S	B	T	T	B						S	S					T	T					T	T					S	S					T	T					T	.	.	.	.	.	.	.	.	T					S	S					T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.	.	.	150
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	I	G	Q	S	T	R	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V	V	V	S	G	N	L	P	S	K	D	G	K	Y	S	L	Y	C	A	V	I	V	K	K	V	D	A	K	T	R	G	K	V	G	I
Query Conservation
Alig confidence																																				.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		L	V	A	V	H	Q	F	C	F	V	G	D	Y	S	M	V	A	G	L	A	K	V	V	Q	D	V	P	P	Y	S	T	V	D	G	.	.	.	.	.	.	N	P	S	T	V	V	G	L	N	S	V	G	M	K	R	A	G	F	S	P	E	V	R	N	A	I	K	H	A	Y	K	V	I	Y	H	S	G	I	S	T
Template Known Secondary structure		T					T	T					T	T					T	T					S	B	B		T	T						.	.	.	.	.	.	T	T													T	T	T																		S	S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		267	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	L	L	R	T	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	A	L	D	E	L	E
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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