Job Description P0A9D8 Confidence 99.88% Date Thu Jan 5 11:09:57 GMT 2012 Rank 24 Aligned Residues 178 % Identity 18% Template c3fsbB_ PDB info PDB header:transferase Chain: B: PDB Molecule:qdtc; PDBTitle: crystal structure of qdtc, the dtdp-3-amino-3,6-dideoxy-d-2 glucose n-acetyl transferase from thermoanaerobacterium3 thermosaccharolyticum in complex with coa and dtdp-3-amino-4 quinovose Resolution 1.95 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	E	G	A	E	S	R	Y	F	D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	A	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	S	K	S	A	I	I	K	E	G	V	I	I	G	E	N	V	T	I	E	D	N	V	Y	I	D	Y	G	C	I	I	R	D	N	V	H	I	K	K	G	S	F	I	G	A	R	S	I	L	G	E	Y	L	V	D	F	Y	N	D	R	I	N	K	K	H	P	L	I	I	G	E	N	A	L	I	R	T	E	N
Template Known Secondary structure					T	T					T	T					S	S					T	T					T	T					S	S					T	T					T	T								T	T					T											T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																																				125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	Y	V	N	I	G	A	Y	V	D	E	G	T	M	V	D	T	W	A	T	V	G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	Y	G	D	T	I	I	G	D	N	F	Q	T	G	H	K	V	T	I	R	E	N	T	K	I	G	N	N	V	K	I	G	T	L	S	D	I	Q	H	H	V	Y	I	G	N	Y	V	N	I	H	S	N	V	F	V	G	E	K	S	I	I	K	D	F	V	W	L	F	P	H	V	V	L	T	N	D	P	T	P
Template Known Secondary structure					S	S					S	S					T	T					S	S					S	S					T	T					S	S					S	S					T	T					T	T					T	T					T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		171			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		L	.	.	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	I	G	Q	S	T	R	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V	V	V	S	G	N	L	P	S	K	D	G	K	Y	S	L	Y
Query Conservation			.	.
Alig confidence			.	.																																																		.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		P	S	N	E	L	L	G	V	T	I	E	L	F	A	V	I	A	A	R	S	V	V	L	P	G	I	H	I	N	E	D	A	L	V	G	A	G	A	V	V	T	K	D	V	P	K	E	T	V	V	V	G	.	.	.	.	.	.	N	P	A	R	E	I	C	S	I	R	K	I	K	N	K	I	T	G	E	Q	V	Y
Template Known Secondary structure		S		S									T	T					T	T					T	T					T	T					T	T					S		B		T	T						.	.	.	.	.	.	T	T							G	G	G		B		T	T	T			B
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	V	I	V	K	K	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	W	R	Y	T	F	K	R	G
Template Known Secondary structure		S	G	G	G	T			T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions