Job Description P0A9D8 Confidence 99.84% Date Thu Jan 5 11:09:57 GMT 2012 Rank 36 Aligned Residues 162 % Identity 18% Template c2wlgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polysialic acid o-acetyltransferase; PDBTitle: crystallographic analysis of the polysialic acid o-2 acetyltransferase oatwy Resolution 1.90 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.
Predicted Secondary structure																																																				.	.	.	.																			.	.	.	.
Query SS confidence																																																				.	.	.	.																			.	.	.	.
Query Sequence		L	S	F	R	I	N	D	N	Q	V	I	E	G	A	E	S	R	Y	F	D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	A	V	R	Q	G	.	.	.	.	A	F	I	A	R	N	T	V	L	M	P	S	Y	V	N	I	G	A	.	.	.	.	Y	V	D	E
Query Conservation																																																				.	.	.	.																			.	.	.	.
Alig confidence																																																				.	.	.	.																			.	.	.	.
Template Conservation
Template Sequence		M	Y	S	E	Q	G	I	N	N	T	I	N	I	S	T	T	S	L	T	N	A	T	Q	L	T	V	I	G	N	N	N	S	V	Y	I	G	N	N	C	K	I	V	S	S	N	I	R	L	K	G	N	N	I	T	L	F	I	A	D	D	V	E	I	M	G	L	V	C	S	L	H	S	D	C	S	L	Q	I	Q	A
Template Known Secondary structure							S	S	S							T	T		B		T	T							S	S	S							T	T					S							S	S	S							T	T					S							T	T							T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		137	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	M	V	D	T	W	A	T	V	.	.	.	G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	.	.	.	.	.	.	.	.	.	.	.	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I
Query Conservation												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	T	M	G	N	G	E	I	T	I	A	E	K	G	K	I	S	I	G	K	D	C	M	L	A	H	G	Y	E	I	R	N	T	D	M	H	P	I	Y	S	L	E	N	G	E	R	I	N	H	G	K	D	V	I	I	G	N	H	V	W	L	G	R	N	V	T	I	L	K	G	V	C	I	P	N	N	V	V	V
Template Known Secondary structure		T					S							T	T							T	T					T	T					S			S	S			B		T	T	T			B											T	T					T	T					T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		S	M	G	V	Y	I	G	Q	S	T	R	.	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V
Query Conservation													.
Alig confidence													.								.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		G	S	H	T	V	L	Y	K	S	F	K	E	P	N	C	V	I	A	G	.	.	.	.	.	.	S	P	A	K	I	V
Template Known Secondary structure			T	T					S						S					T	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions