Job Description P0A9D8 Confidence 99.52% Date Thu Jan 5 11:09:57 GMT 2012 Rank 52 Aligned Residues 194 % Identity 15% Template c1yp3C_ PDB info PDB header:transferase Chain: C: PDB Molecule:glucose-1-phosphate adenylyltransferase small PDBTitle: crystal structure of potato tuber adp-glucose2 pyrophosphorylase in complex with atp Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	N	I	I	E	T	A	F	E	R	R	A	E	I	T	P	A	N	A	D	T	V	T	R	E	A	V	N	Q	V	I	A	L	L	D	S	G	A	L	R	V	A	E	K	I	D	G	Q	W	V	T	H	Q	W	L	K	K	A	V	L	L	S	F	R	I	N	D	N	Q	V	I	E	G	A	E	S	R	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	N	L	L	R	D	K	F	P	G	A	N	D	F	G	S	E	V	I	P	G	A	T	S	L	G	M	R	V	Q	A	Y	L	Y	D	G	Y	W	E	D	I	G	T	I	E	A	F	Y	N	A	N	L	G	I	T	K	K	P	V	P	D	F	S	F	Y	D	R	S	A	P	I	Y	T	Q	P	R	Y	L	P
Template Known Secondary structure								T	T		T	T				T	T	T	T							T	T	T										S						S	S										G	G	G		S	S			S	S		S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.														.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	.	.	.	.	P	A	A	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	S	Y	V	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	V	D	E	G	T	M	V	D	T	W	A	T	V
Query Conservation																										.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.												.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		P	S	K	M	L	D	A	D	V	T	D	.	.	S	V	I	G	E	G	C	V	I	K	N	C	K	I	H	H	S	V	V	G	L	R	S	C	I	S	E	G	A	I	I	E	D	S	L	L	M	G	A	D	Y	Y	E	T	D	A	D	R	K	L	L	A	A	K	G	S	V	P	I	G	I	G	K	N	C	H	I
Template Known Secondary structure												S	.	.					T	T										S					T	T					T	T					S							S	S													T	T				S	B	B		T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	.	I	V	E	E	G	S	V	I	S	M	G	V	Y	I
Query Conservation																																																		.
Alig confidence			.																			.	.	.	.	.	.	.	.																					.
Template Conservation			.																			.	.	.	.	.	.	.	.
Template Sequence		K	.	R	A	I	I	D	K	N	A	R	I	G	D	N	V	K	I	I	N	.	.	.	.	.	.	.	.	K	D	N	V	Q	E	A	A	R	E	T	D	G	Y	F	I	K	S	G	I	V	T	V	I	K	D	A	L	I	P	S	G	I	I	I
Template Known Secondary structure			.	S					T	T					T	T						.	.	.	.	.	.	.	.	T	T								G	G	G	T					T	T						T	T					T	T		B
Template Predicted Secondary structure			.																			.	.	.	.	.	.	.	.
Template SS confidence
		398		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.									.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions