Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAR0
Confidence3.74%DateThu Jan 5 11:13:32 GMT 2012
Rank50Aligned Residues11
% Identity36%Templatec3rbbA_
PDB info PDB header:viral protein, protein bindingChain: A: PDB Molecule:protein nef; PDBTitle: hiv-1 nef protein in complex with engineered hck sh3 domain
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   4.....10....
Predicted Secondary structure 






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Query Sequence  YSPKRHDIAQL
Query Conservation 



  




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Template Conservation 

 

  

 
Template Sequence  WSQRRQEILDL
Template Known Secondary structure 

Template Predicted Secondary structure 
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   106...110......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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