 |
| Job Description | P0AAR0 | | Confidence | 5.40% | Date | Thu Jan 5 11:13:32 GMT 2012 |
| Rank | 27 | Aligned Residues | 11 |
| % Identity | 36% | Template | c2xi1A_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:nef; |
PDBTitle: crystal structure of the hiv-1 nef sequenced from a patient's sample
|
| Resolution | 3.50 Å |
|
| | |
4 | . | . | . | . | . | 10 | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|  | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Y | S | P | K | R | H | D | I | A | Q | L |
| Query Conservation | |
|
|
|
| | |
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
| | |
|
|
|
|
| Template Sequence | |
Y | S | Q | R | E | K | E | I | L | D | L |
| Template Known Secondary structure | |
|
| | | | | | | | | |
| Template Predicted Secondary structure | |
 |
| | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
| | |
102 | . | . | . | . | . | . | . | 110 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
