Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAR0
Confidence3.56%DateThu Jan 5 11:13:32 GMT 2012
Rank53Aligned Residues8
% Identity25%Templatec1ot0A_
PDB info PDB header:antibioticChain: A: PDB Molecule:50s ribosomal protein l1; PDBTitle: structure of antimicrobial peptide, hp (2-20) and its2 analogues derived from helicobacter pylori, as determined3 by 1h nmr spectroscopy
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.
Predicted Secondary structure 
Query SS confidence 







Query Sequence  MQDLQKWR
Query Conservation   


  
 
Alig confidence 







Template Conservation 







Template Sequence  FSKIQNWK
Template Predicted Secondary structure 


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   12.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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