|   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | L | G | Q | E | V | I | D | N | S | V | D | E | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | H | A | K | R | V | D | V | I | L | H | A | D | . |
Q | S | L | E | V | I | D | D | G | R | G | M | P | V | D | I | H | P | E | E | G | V | P | A | V | E | L | I | L | C | R | L | H | A | G | G |
Query Conservation |   |
  |
|   |   |
|
|
|   |
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|   |
|   |
|   |   |
| . |
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|
|
|   |   |
| . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|
|   |
|   |
Template Sequence |   |
I | F | L | R | E | L | I | S | N | A | S | D | A | L | D | K | I | R | Y | E | S | L | T | D | P | S | K | L | D | S | G | K | E | L | K | I | D | I | I | P | N | P | Q | E | R | T | L | T | L | V | D | T | G | I | G | M | T | K | A | D | . |
. |
. |
. |
. |
. |
. |
. |
L | I | N | N | L | G | T | I | A | K | S | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| G | G | G | G | T | T |
|
|
|
|
|  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |
| S | S |
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |  | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . |
  |
  |   |
99 | 100 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | F | . |
. |
. |
. |
. |
. |
S | N | K | N | Y | Q | F | S | G | G | L | H | G | V | G | I | S | V | V | N | A | L | S | K | R | V | E | V | N | V | R | R | D | G | Q | V | Y | N | I | A | F | E | N | G | E | K | V | Q | D | L | Q | V | V | G | T | C | G | K | R | N | T | G | T | S | V | H | F | W | P | D | E | T |
Query Conservation |   |
|
| . | . | . | . | . | . |
|
|   |   |   |
|   |
|
|
|   |
|
|   |
|
|
|
|   |
|
|   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|   |   |
Alig confidence |   |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |
Template Sequence |   |
T | K | A | F | M | E | A | L | Q | A | G | A | D | I | S | M | I | G | Q | F | G | V | G | F | Y | S | A | Y | L | V | A | E | K | V | V | V | I | T | K | H | N | D | D | E | Q | Y | A | W | E | S | S | A | G | . |
G | S | F | T | V | R | A | D | H | G | E | P | I | G | R | G | T | K | V | I | L | H | L | K | E | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T |
|
| G | G | G | G | G | G | G | T |
| G | G | G | G | G | G | G | T |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
|  |  |  |  |  |
| S | T | . | T |  |  |  |  |  |  |
|
| S | S |
|
| S | S |  |  |  |  |  |  |  |  |
| G | G |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
  |
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
. | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | F | D | S | P | R | F | S | V | S | R | L | T | H | V | L | K | A | K | A | . |
V | L | C | P | G | V | E | I | T | F | K | D | E |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
| . |   |
|   |   |
|
|   |
|   |   |   |
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
Template Sequence |   |
. |
. |
Q | T | E | Y | L | E | E | R | R | V | K | E | V | V | K | K | H | S | Q | F | I | G | Y | P | I | T | L | Y | L | E | K | E |
Template Known Secondary structure |   |
. | . | G | G | G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| S | S |
|  |  |  |
|
|
|
| . |
Template Predicted Secondary structure |   |
. | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |