Job Description P20083 Confidence 30.32% Date Thu Jan 5 11:37:45 GMT 2012 Rank 98 Aligned Residues 83 % Identity 23% Template d1gkub3 SCOP info Prokaryotic type I DNA topoisomerase Prokaryotic type I DNA topoisomerase Prokaryotic type I DNA topoisomerase Resolution 2.7

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		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.																			.	.	.	.	.	440	.	.	.	.	.	.																						.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	N	R	T	E	L	F	L	V	E	G	D	S	A	G	G	S	A	K	Q	A	R	D	R	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	I	M	P	L	K	G	K	I	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	W
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	I	K	P	A	L	F	I	V	E	S	P	T	K	A	R	Q	I	S	R	F	F	G	K	P	S	V	K	V	L	D	G	A	V	V	Y	E	I	P	M	Q	K	Y	V	L	M	V	T	A	S	I	G	H	V	V	D	L	I	T	N	R	G	F	H	G	V	L	V	N	G	R	F	V	P	V	Y	A	S	I
Template Known Secondary structure												S										G	G	G	S								T	T									S	S										S		S					S	S	S	S	T	T	S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	S	S	D	E	V	L	A	S	Q	E	V	H	D	I	S	V	A	I	G	I	D	P	D	S	D	D	L	S	Q	L	R	Y	G	K	I	C	I	L	A	D	A	D	S	D	G	L	H	I	A	T	L	L	C	A	L	F
Query Conservation
Alig confidence												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	N	S	R	S	R	I	E	A	.	.	L	R	K	L	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	F	V	I	V	G	T	D	P	D	T	E	G	E	K	I	A	W	D	L	K	N	L	L
Template Known Secondary structure												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.			S								S	S
Template Predicted Secondary structure												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		582	.	.	.	.	.	.	.	590	.			.	.	.	.	.	.															.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions