Job Description P20083 Confidence 100.00% Date Thu Jan 5 11:37:45 GMT 2012 Rank 15 Aligned Residues 191 % Identity 32% Template c3qx3B_ PDB info PDB header:isomerase/dna/isomerase inhibitor Chain: B: PDB Molecule:dna topoisomerase 2-beta; PDBTitle: human topoisomerase iibeta in complex with dna and etoposide Resolution 2.16 Å

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		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430				.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		K	K	L	T	S	G	P	A	L	P	G	K	L	A	D	C	T	A	Q	D	L	N	R	T	E	L	F	L	V	E	G	D	S	A	G	G	S	A	K	Q	A	R	.	.	.	D	R	E	Y	Q	A	I	M	P	L	K	G	K	I	L	N	T	W	E	V	S	S	D	E	V	L	A	S	Q	E	V	H	D	I	S
Query Conservation																																												.	.	.
Alig confidence													.																															.	.	.
Template Conservation													.
Template Sequence		S	K	I	K	G	I	P	K	L	D	D	.	A	N	D	A	G	G	K	H	S	L	E	C	T	L	I	L	T	E	G	D	S	A	K	S	L	A	V	S	G	L	G	V	I	G	R	D	R	Y	G	V	F	P	L	R	G	K	I	L	N	V	R	E	A	S	H	K	Q	I	M	E	N	A	E	I	N	N	I	I
Template Known Secondary structure						S		T	T		B		.		T	T	T	T	S	T	T	G	G	G								S																T	T	T								S	S					T	T								T
Template Predicted Secondary structure													.
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
		466	.	.	.	470	.	.	.	.						.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		V	A	I	G	I	D	P	D	S	.	.	.	.	.	D	D	L	S	Q	L	R	Y	G	K	I	C	I	L	A	D	A	D	S	D	G	L	H	I	A	T	L	L	C	A	L	F	V	K	H	F	R	A	L	V	K	H	G	H	V	Y	V	A	L	P	P	L	Y	R	I	D	L	G	K	E	V	Y	Y	A	L	T
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	G	L	Q	Y	K	K	S	Y	D	D	A	E	S	L	K	T	L	R	Y	G	K	I	M	I	M	T	D	Q	D	Q	D	G	S	H	I	K	G	L	L	I	N	F	I	H	H	N	W	P	S	L	L	K	H	G	F	L	E	E	F	I	T	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T			T	T					S	S	S	G	G	G	G		S		S								S	S																								T											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	E	K	E	G	V	L	E	Q	L	K	R	K	K	G	K	P	N	V	Q	R	F	K	G	L	G	E	M	N	P	M	Q	L	R	E	T	T	L	D	P	N	T	R	R	L	V	Q	L	T	I	D	D	E	D	D	Q	R	T	D	A	M	M	D	M	L	L	A	K	K	R	S	E	D	R	R	N	W	L	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	A	K	E	Y	F	A	D	M	E	R	H	R	I	L	F	R	Y	A	G	P	E	D	.	.	.	.	D	A	A	I	T	L	A	F	S	K	K	K	I	D	D	R	K	E	W	L	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T												S				.	.	.	.										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
																																	638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.					.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
		621	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	D	M	A	E	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	M	E	D	R	R	Q	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		683	.	.	.	.	.	.	690	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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