Job Description P20083 Confidence 100.00% Date Thu Jan 5 11:37:45 GMT 2012 Rank 10 Aligned Residues 193 % Identity 45% Template c2xcsD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:dna gyrase subunit b, dna gyrase subunit a; PDBTitle: the 2.1a crystal structure of s. aureus gyrase complex with gsk2994232 and dna Resolution 2.10 Å

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		K	L	A	D	C	T	A	Q	D	L	N	R	T	E	L	F	L	V	E	G	D	S	A	G	G	S	A	K	Q	A	R	D	R	E	Y	Q	A	I	M	P	L	K	G	K	I	L	N	T	W	E	V	S	S	D	E	V	L	A	S	Q	E	V	H	D	I	S	V	A	I	G	I	D	P	D	S	.	D	D	L	S
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		K	L	A	D	C	S	S	K	S	P	E	E	C	E	I	F	L	V	E	G	D	S	A	G	G	S	T	K	S	G	R	D	S	R	T	Q	A	I	L	P	L	R	G	K	I	L	N	V	E	K	A	R	L	D	R	I	L	N	N	N	E	I	R	Q	M	I	T	A	F	G	T	G	I	G	G	D	F	D	L	A
Template Known Secondary structure				B			S				T	T	T							S	S											S		T	T	T								S	S				T	T	T	S																			T	S		S	G	G	G			G	G
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	Y	G	K	I	C	I	L	A	D	A	D	S	D	G	L	H	I	A	T	L	L	C	A	L	F	V	K	H	F	R	A	L	V	K	H	G	H	V	Y	V	A	L	P	P	L	Y	R	I	D	L	G	K	E	V	Y	Y	A	L	T	E	E	E	K	E	G	V	L	E	Q	L	K	R	K	K	G	K	P
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	R	Y	H	K	I	V	I	M	T	D	A	D	V	D	G	A	H	I	R	T	L	L	L	T	F	F	Y	R	F	M	R	P	L	I	E	A	G	Y	V	Y	I	A	Q	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G		S		S								S	S																								T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Q	R	F	K	G	L	G	E	M	N	P	M	Q	L	R	E	T	T	L	D	P	N	T	R	R	L	V	Q	L	T	I	D	D	E	D	D	Q	R	T	D	A	M	M	D	M	L	L	A	K	K	R	S	E	D	R	R	N	W	L	Q	E	K	G	D	M	A	E	I	E	V
Query Conservation
Alig confidence		.	.																																.	.																		.
Template Conservation		.	.																																.	.																		.
Template Sequence		.	.	T	G	Y	K	G	L	G	E	M	N	A	D	Q	L	W	E	T	T	M	N	P	E	H	R	A	L	L	Q	V	K	L	.	.	E	D	A	I	E	A	D	Q	T	F	E	M	L	M	G	D	V	.	V	E	N	R	R	Q	F	I	E	D	N	A	V	Y	N	E	R	N	I
Template Known Secondary structure		.	.	S	S		S	S	G	G	G	S										T		T	T	T									.	.															S	S		.
Template Predicted Secondary structure		.	.																																.	.																		.
Template SS confidence
				544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.			.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.		.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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