Job Description P20083 Confidence 98.83% Date Thu Jan 5 11:37:45 GMT 2012 Rank 44 Aligned Residues 223 % Identity 17% Template c2o1wB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:endoplasmin; PDBTitle: structure of n-terminal plus middle domains (n+m) of grp94 Resolution 3.40 Å

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		36	.	.	.	40	.	.	.	.	.	.															.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		G	Q	E	V	I	D	N	S	V	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	G	H	A	K	R	V	D	V	I	L	H	A	D	.	Q	S	L	E	V	I	D	D	G	R	G	M	P	V	D	I	H	P	E	E	G	V	P	A	V	E	L	I	L	C	R	L	H	A	G	G	K	F
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		L	R	E	L	I	S	N	A	S	D	A	L	D	K	I	R	L	I	S	L	T	D	E	N	A	L	A	G	N	E	E	L	T	V	K	I	K	C	D	K	E	K	N	L	L	H	V	T	D	T	G	V	G	M	T	R	E	E	.	.	.	.	.	.	.	L	V	K	N	L	G	T	I	A	K	S	G	T	S	E
Template Known Secondary structure																								S	S	G	G	G	G		S										T	T	T	T								S	S							.	.	.	.	.	.	.					T	T	S			S	S		T	T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		101	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																																										.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																																										.	.
Query Sequence		S	N	K	N	Y	Q	F	S	G	.	.	.	.	.	.	.	.	.	.	G	L	H	G	V	G	I	S	V	V	N	A	L	S	K	R	V	E	V	N	V	R	R	D	G	Q	V	Y	N	I	A	F	E	N	G	E	K	V	Q	D	L	Q	V	V	G	T	C	G	K	R	N	T	G	T	S	V	H	.	.	F	W
Query Conservation											.	.	.	.	.	.	.	.	.	.																																																										.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																																																				.						.	.
Template Conservation																																																																								.
Template Sequence		F	L	N	K	M	T	E	A	Q	E	D	G	Q	S	T	S	E	L	I	G	Q	F	G	V	G	F	Y	S	A	F	L	V	A	D	K	V	I	V	T	S	K	H	N	N	D	T	Q	H	I	W	E	S	D	S	N	E	F	S	V	I	A	D	P	R	G	N	T	L	G	R	.	G	T	T	I	T	L	V	L	K
Template Known Secondary structure		T	T	T	T	T	T	T	S	S	S	S	S										T	T		T	T	G	G	G	G	G	T											T	T	S									S	S								T	T		S		S	S	S	.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.														.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	E	T	F	F	D	S	P	R	F	S	V	S	R	L	T	H	V	L	K	A	K	A	V	L	C	P	G	V	E	I	T	F	K	D	E	I	N	N	T	E	Q	R	W	C	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	D	G	L	N	D	Y	L	A	E	A	V	N	G	L	P	T	L	P	E
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																			.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																			.
Template Sequence		E	E	A	S	D	Y	.	.	.	.	L	E	L	D	T	I	K	N	L	V	K	K	Y	S	Q	F	I	N	.	F	P	I	Y	V	W	S	S	K	T	K	T	V	W	D	W	E	L	M	N	D	I	K	P	I	W	Q	R	P	S	K	E	V	E	D	D	E	Y	K	A	F	Y	K	S	F	S	K	E	S	D	D
Template Known Secondary structure		T	T		G	G	G	.	.	.	.	G	S													T	T			.	S																			S			S		G	G	G	S		G	G	G												T	T	T		T	T	S
Template Predicted Secondary structure								.	.	.	.																			.
Template SS confidence
		253	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	F	I	G	N	F	A	G	D	T	E	A	V	D	W	A	L	L	W	L	P	E	G	G	E	L	L	T	E	S	Y	V	N	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	A	Y	I	H	F	T	A	E	G	E	V	T	F	K	S	I	L	F	V	P	T	S	A	P	R	Y	I	K	L	Y	V	R	R	V
Template Known Secondary structure			S									S	S	S										S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions