Return to main results Retrieve Phyre Job Id

Job DescriptionP20083
Confidence99.16%DateThu Jan 5 11:37:45 GMT 2012
Rank38Aligned Residues152
% Identity21%Templatec2akpA_
PDB info PDB header:chaperoneChain: A: PDB Molecule:atp-dependent molecular chaperone hsp82; PDBTitle: hsp90 delta24-n210 mutant
Resolution1.94 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40........ .50.........60.. .......70.........80.........90.........
Predicted Secondary structure  ..............






.


















Query SS confidence 













. . . . . . . . . . . . . .













.




































Query Sequence  LGQEVIDNSVDEAL. . . . . . . . . . . . . . AGHAKRVDVILHAD. QSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGK
Query Conservation 
  


 




  .............. 
    
 
 
  
.
 


 







  
    
  




  
 



Alig confidence 













..............













.















........












Template Conservation   







 

                      
          
 
 


 

    ........
      

 
 
Template Sequence  FLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAE. . . . . . . . LINNLGTIAKSGT
Template Known Secondary structure 
TTS



TTTT
S



........

Template Predicted Secondary structure 






















........




Template SS confidence 















































































   30.........40.........50.........60.........70.........80........ .90.........100.
 
   100.........110.........120.........130.........140.........150.........160.........170...
Predicted Secondary structure  ......






























Query SS confidence  . . . . . .









































































Query Sequence  . . . . . . FSNKNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETF
Query Conservation  ......


   
 


 

 



 

 
  
 
     
  
 
    
        
        

 


 

   
Alig confidence  ......








































































.
Template Conservation                 

  


  
 
       
 
                               

 
 
 
   .
Template Sequence  KAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDD.
Template Known Secondary structure  TTTS


SSSTT

GGGGGGGT
TTS

SSS



SS


SS
GG.
Template Predicted Secondary structure 










































.
Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160.........170.........180
 
   174.....180.........190......
Predicted Secondary structure 







Query SS confidence 






















Query Sequence  FDSPRFSVSRLTHVLKAKAVLCP
Query Conservation 
       
 
   
   
 
  
Alig confidence  .





















Template Conservation  .         
  

      
 
Template Sequence  . QLEYLEEKRIKEVIKRHSEFVA
Template Known Secondary structure  .GGGGG
TTSSS
Template Predicted Secondary structure  .




Template SS confidence 






















   181........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions