Job Description P20083 Confidence 22.47% Date Thu Jan 5 11:37:45 GMT 2012 Rank 103 Aligned Residues 60 % Identity 23% Template c1nuiA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna primase/helicase; PDBTitle: crystal structure of the primase fragment of bacteriophage t7 primase-2 helicase protein Resolution 2.90 Å

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		413	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		E	L	F	L	V	E	G	D	S	.	A	G	G	S	A	K	Q	A	R	D	R	E	Y	Q	A	I	M	P	L	K	G	K	I	L	N	T	W	E	V	S	S	D	E	V	L	A	S	Q	E	V	H	D	I	S	V	A	I	G	I	D	P	D	S	D	D	L	S	Q	L	R	Y	G	K	I	C	I	L	A	D	A
Query Conservation											.
Alig confidence											.																			.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	V	T	E	G	E	I	D	M	L	T	V	M	E	L	Q	D	C	K	Y	P	V	V	S	L	G	.	.	.	.	.	.	H	G	A	S	A	A	K	K	T	C	A	A	N	Y	E	Y	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	E	Q	I	I	L	M	F	D	M
Template Known Secondary structure							S	S												T	T		S						T	.	.	.	.	.	.	T	T	T	T	T								T					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B	S								S
Template Predicted Secondary structure																														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																		.	.	200	.	.	.	.	.	.	.	.
		492	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	A	G
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions