Job Description P20083 Confidence 99.50% Date Thu Jan 5 11:37:45 GMT 2012 Rank 34 Aligned Residues 248 % Identity 18% Template c1bknA_ PDB info PDB header:dna repair Chain: A: PDB Molecule:mutl; PDBTitle: crystal structure of an n-terminal 40kd fragment of e. coli2 dna mismatch repair protein mutl Resolution 2.90 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		P	N	H	L	G	Q	E	V	I	D	N	S	V	D	E	A	L	A	G	H	A	K	R	V	D	V	I	L	H	A	D	Q	.	.	S	L	E	V	I	D	D	G	R	G	M	P	V	D	I	H	P	E	E	G	V	P	A	V	E	L	I	L	C	R	L	H	A	G	G	K	F	S	N	K	N	Y	Q	F	S	G
Query Conservation																																		.	.
Alig confidence																.	.	.			.													.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.			.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	S	V	V	K	E	L	V	E	N	S	L	D	.	.	.	A	G	.	A	T	R	I	D	I	D	I	E	R	G	G	A	K	L	I	R	I	R	D	N	G	C	G	I	K	K	D	E	.	.	.	.	.	.	.	.	.	.	.	.	L	A	L	A	L	A	I	A	S	L	D	D	L	E	A	I	I	S	L
Template Known Secondary structure																.	.	.	T	T	.		S								T	T	T	T	S							S	S								.	.	.	.	.	.	.	.	.	.	.	.								T	T					T	S		G	G	G
Template Predicted Secondary structure																.	.	.			.																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.													.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	H	G	V	G	I	S	V	V	N	A	L	S	K	R	V	E	V	N	V	R	R	D	G	Q	V	Y	N	I	A	F	E	N	G	E	K	V	Q	D	L	Q	V	V	G	T	C	G	K	R	N	T	G	T	S	V	H	F	W	P	D	E	T	F	F	D	S	P	R	F	S	V	S	R	L	T	H	V	L	K
Query Conservation
Alig confidence																.																				.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																.																				.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		G	F	R	G	E	A	L	A	S	I	S	S	V	S	.	R	L	T	L	T	S	R	T	A	E	Q	Q	E	A	W	Q	A	Y	A	.	.	.	.	.	.	.	.	V	T	V	K	P	A	A	H	P	V	G	T	T	L	E	V	.	.	.	.	.	.	L	D	T	E	K	T	E	F	N	H	I	D	E	I	I	R
Template Known Secondary structure													T	T	S	.									S	S	S									.	.	.	.	.	.	.	.										S	S						.	.	.	.	.	.					S
Template Predicted Secondary structure																.																				.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		A	K	A	V	L	C	P	G	V	E	I	T	F	K	D	E	I	N	N	T	E	Q	R	W	C	Y	Q	D	G	L	N	D	Y	L	A	E	A	V	N	G	L	P	T	L	P	E	K	P	F	I	G	N	F	A	G	D	T	E	A	V	D	W	A	L	L	W	L	P	E	G	G	E	L	.	.	.	L	T	E	S
Query Conservation																																																																											.	.	.
Alig confidence																																																																											.	.	.
Template Conservation
Template Sequence		R	I	A	L	A	R	F	D	V	T	I	N	L	S	H	N	G	K	I	V	R	Q	Y	R	A	V	P	E	G	G	Q	K	E	R	R	L	G	A	I	C	G	T	A	F	L	E	Q	A	L	A	I	E	W	Q	H	G	D	L	T	L	R	G	W	V	A	D	P	N	H	T	T	P	A	L	A	E	I	Q	Y	C
Template Known Secondary structure								T	T	S							T	T											T	T																											T	T										G	G	G			T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	N	L	I	P	T	M	Q	G	G	T	H	V	N	G	L	R	Q	G	L	L	D	A	M	R	E	F	C	E	Y	R	N	I	L	P	R	G	V	K	L	S	A	E	D	I	W	D	R	C	A	Y	V	L	S	V	K	M	Q	D	P	Q	F	A
Query Conservation
Alig confidence											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	N	G	R	M	M	R	D	.	.	.	.	.	R	L	I	N	H	A	I	R	Q	A	C	E	D	K	L	G	A	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	A	F	V	L	Y	L	E	I	D	P	H	Q	V	S
Template Known Secondary structure				T	T						.	.	.	.	.															S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S
Template Predicted Secondary structure											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.																.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions