Job Description P24178 Confidence 20.40% Date Thu Jan 5 11:40:55 GMT 2012 Rank 236 Aligned Residues 112 % Identity 26% Template c3bciA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond protein a; PDBTitle: crystal structure of staphylococcus aureus dsba Resolution 1.81 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.					.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.							.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.							.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	L	Y	G	I	K	N	C	D	T	I	K	K	A	R	.	.	.	.	R	W	L	E	A	N	.	.	.	.	.	N	I	D	Y	R	F	H	D	Y	R	V	D	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.							.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.							.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	V	Y	G	D	Y	K	C	P	Y	C	K	E	L	D	E	K	V	M	P	K	L	R	K	N	Y	I	D	N	H	K	V	E	Y	Q	F	V	N	L	A	F	L	G	K	D	S	I	V	G	S	R	A	S	H	A	V	L	M	Y	A	P	K	S	F	L	D	F	Q	K	Q	L	F	A	A	Q	Q	D	E	N
Template Known Secondary structure								T	T																			T	T	T	T	T	S	S										S		T	T																G	G	G											T				T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
						38	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.	.																.
Query SS confidence		.	.	.	.																.
Query Sequence		.	.	.	.	D	S	E	L	L	N	D	F	I	N	E	L	G	W	E	.	A	L	L	N	T	R	G	T	T	W	R	K	L	D	E	T	T	R	N	K	I	T	D	A	A	S	A	A	A	L	M	T	E	M	P	A	I	I	K	R	P	L	L	C	V	P	G	K	P	M	L	L	G	F	S	D	S	S	Y	Q
Query Conservation		.	.	.	.																.
Alig confidence		.	.	.	.																.																						.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		K	E	W	L	T	K	E	L	L	D	K	H	I	K	Q	L	H	L	D	K	E	T	E	N	K	I	I	K	D	Y	K	T	K	D	S	K	S	W	K	A	A	.	.	.	.	E	K	D	K	K	I	A	K	D	N	H	I	K	T	T	P	T	A	F	I	N	G	E	K	V	E	D	P	Y	D	Y	E	S	Y	E
Template Known Secondary structure		S														T	T																S	T	T								.	.	.	.										T	T			S	S	S					T	T				S		T	T
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		113	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	F	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	L	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions