Job Description P24178 Confidence 24.40% Date Thu Jan 5 11:40:55 GMT 2012 Rank 225 Aligned Residues 74 % Identity 15% Template c2vimA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: x-ray structure of fasciola hepatica thioredoxin Resolution 1.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		M	V	T	L	Y	G	I	K	N	C	D	T	I	K	K	A	R	R	W	L	E	A	.	.	.	.	.	N	N	I	D	Y	R	F	H	D	Y	R	V	D	G	L	D	S	E	L	L	N	D	F	I	N	E	L	G	W	E	A	L	L	N	T	R	G	T	T	W	R	K	L	D	E	T	T	R	N	K	I	T	D
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.														.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	V	D	F	F	A	Q	W	C	G	P	C	R	N	I	A	P	K	V	E	A	L	A	K	E	I	P	E	V	E	F	A	K	V	D	V	D	Q	N	.	.	.	.	.	.	.	E	E	A	A	A	K	Y	S	V	T	A	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T																			T	T	S							T	T	T		.	.	.	.	.	.	.							T	T			S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		A	A	S	A	A	A	L	M	T	E	M	P	A	I	I	K	R	P	L	L	C	V	P	G	K	.	.	P	M	L	L	G	F	S	D	S	S	Y	Q	Q	F	F	H	E
Query Conservation																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	V	F	I	K	D	G	K	E	V	D	R	F	S	G	A	N	E	T	K	L	R	E	T	I	T	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions