Job Description P31062 Confidence 41.13% Date Thu Jan 5 11:46:59 GMT 2012 Rank 383 Aligned Residues 89 % Identity 22% Template d2fbha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		V	N	K	K	Q	L	A	D	I	F	G	A	S	I	R	T	I	Q	N	.	.	.	.	W	Q	E	Q	G	M	P	V	L	R	G	G	G	K	G	N	E	V	L	Y	D	S	A	A	V	I	K	W	Y	A	E	R	D	A	E	I	E	N	E	K	L	R	R	E	V	E	E	L	L	Q	A	S	E	T	D	L	Q
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	Q	R	E	L	A	Q	S	V	G	V	E	G	P	T	L	A	R	L	L	D	G	L	E	S	Q	G	L	V	R	R	L	A	V	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	R	A
Template Known Secondary structure			B									T																T	T	S							B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B		S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																																								.	.	90	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	T	I	E	Y	E	R	H	R	L	T	R	A	Q	A	D	A	Q	E	L	K	N	A	R	D	S	A	E	V	V	E	T	A	F	C	T	F	V	L	S	R	I	A	G	E	I	A	S	I	L	D	G
Query Conservation
Alig confidence																																								.
Template Conservation																																								.
Template Sequence		K	H	I	V	L	T	P	K	A	D	V	L	I	A	D	I	E	A	I	A	A	S	V	R	N	D	V	L	T	G	I	D	E	S	E	Q	A	L	.	C	Q	Q	V	L	L	R	I	L	A	N	L	E	N
Template Known Secondary structure								T	T																				T	T	T									.														T
Template Predicted Secondary structure																																								.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions